Package org.apache.airavata.xbaya

Examples of org.apache.airavata.xbaya.XBayaConfiguration

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        }
        this.parameterPanel.layout(inputNodes.size(), 3, GridPanel.WEIGHT_NONE, 2);
//        this.instanceNameTextField.setText(workflow.getName()+"_"+Calendar.getInstance().getTime().toString());
        this.topicTextField.setText(UUID.randomUUID().toString());

        XBayaConfiguration config = this.engine.getConfiguration();
        this.gfacTextField.setText(config.getGFacURL().toString());
        URI workflowInterpreterURL = config.getWorkflowInterpreterURL();
        if (null != workflowInterpreterURL) {
            this.workflowInterpreterTextField.setText(workflowInterpreterURL.toString());
        } else {
            this.workflowInterpreterTextField.setText(XBayaConstants.DEFAULT_WORKFLOW_INTERPRETER_URL);
        }

        AiravataAPI airavataAPI = config.getAiravataAPI();
        if (null != airavataAPI) {
            this.RegistryTextField.setText(config.getRegistryURL());
        } else {
            this.RegistryTextField.setText(XBayaConstants.REGISTRY_URL.toASCIIString());
        }

        this.dialog.show();
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//            registry = new JCRComponentRegistry(airavataAPI);
//        } catch (Exception e) {
//            this.engine.getGUI().getErrorWindow().error(e.getMessage());
//            return;
//        }
        XBayaConfiguration configuration = this.engine.getConfiguration();
        this.engine.setAiravataAPI(airavataAPI);
        configuration.setAiravataAPI(airavataAPI);
        configuration.setRegigstryUserName(userName);
        configuration.setRegistryPassphrase(password);
        configuration.setRegistryURL(url);
        configuration.setDefaultGateway(gateway);
        engine.updateXBayaConfigurationServiceURLs();
        hide();

//        this.loader.load(registry);
    }
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            }

        }
        log.debug("Input all set");

        XBayaConfiguration conf = null;
        try {
            conf = getConfiguration(configurations);
            conf.setTopic(topic);
            conf.setRunWithCrossProduct(true);
        } catch (URISyntaxException e1) {
            throw new WorkflowRuntimeException(e1);
        }
        WorkflowInterpretorEventListener listener = null;
        WorkflowInterpreter interpreter = null;
        AiravataAPI airavataAPI = AiravataAPIFactory.getAPI(gatewayId, username);
    WorkflowInterpreterConfiguration workflowInterpreterConfiguration = new WorkflowInterpreterConfiguration(workflow,topic,conf.getMessageBoxURL(), conf.getBrokerURL(), airavataAPI, conf, null, null);
        workflowInterpreterConfiguration.setGfacEmbeddedMode(gfacEmbeddedMode);
        workflowInterpreterConfiguration.setActOnProvenance(provenance);

        if (builder.getSecurityContext().getAmazonWebservices() != null) {
            workflowInterpreterConfiguration.setAwsSecretKey(builder.getSecurityContext().getAmazonWebservices().getSecretAccessKey());
            workflowInterpreterConfiguration.setAwsAccessKey(builder.getSecurityContext().getAmazonWebservices().getAccessKeyId());
        }
        // WorkflowInterpreter object should create prior creation of Listener, because listener needs the threadlocal variable
        interpreter = new WorkflowInterpreter(workflowInterpreterConfiguration, getInteractor());
        listener = new WorkflowInterpretorEventListener(workflow, conf);
        try {
          log.debug("start listener set");
            listener.start();
        } catch (MonitorException e1) {
            e1.printStackTrace();
        }

        WorkflowContextHeaderBuilder.setCurrentContextHeader(builder.getContextHeader());

        final WorkflowInterpretorEventListener finalListener = listener;
        conf.setAiravataAPI(getAiravataAPI());

        final WorkflowInterpreter finalInterpreter = interpreter;
//        interpreter.setActOnProvenance(provenance);
        interpreter.setProvenanceWriter(runner);
        final String experimentId = topic;
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//            }
        }
    }

    public  XBayaConfiguration getConfiguration(Map<String,String> vals) throws URISyntaxException {
    XBayaConfiguration configuration = new XBayaConfiguration();
    configuration.setBrokerURL(new URI(findValue(vals, BROKER, XBayaConstants.DEFAULT_BROKER_URL.toString())));
    configuration.setGFacURL(new URI(findValue(vals, GFAC, XBayaConstants.DEFAULT_GFAC_URL.toString())));
    configuration.setMessageBoxURL(new URI(findValue(vals, MSGBOX, XBayaConstants.DEFAULT_MESSAGE_BOX_URL.toString())));
    configuration.setMyProxyLifetime(XBayaConstants.DEFAULT_MYPROXY_LIFTTIME);
    configuration.setMyProxyPort(XBayaConstants.DEFAULT_MYPROXY_PORT);
        //This null check will fix some test failures
        if (WorkflowInterpretorSkeleton.configurationContext != null) {
            configuration.setMyProxyServer(findValue(vals, MYPROXY_SERVER, (String) WorkflowInterpretorSkeleton.configurationContext.getProperty(MYPROXY_SERVER)));
            configuration.setMyProxyPassphrase(findValue(vals, MYPROXY_PASS, (String) WorkflowInterpretorSkeleton.configurationContext.getProperty(MYPROXY_PASS)));
            configuration.setMyProxyUsername(findValue(vals, MYPROXY_USER, (String) WorkflowInterpretorSkeleton.configurationContext.getProperty(MYPROXY_USER)));
            configuration.setTrustedCertLocation(findValue(vals, TRUSTED_CERT_LOCATION, (String) WorkflowInterpretorSkeleton.configurationContext.getProperty(TRUSTED_CERT_LOCATION)));
            configuration.setTrustedCertLocation(findValue(vals, MYPROXY_LIFETIME, (String) WorkflowInterpretorSkeleton.configurationContext.getProperty(MYPROXY_LIFETIME)));
        }
    return configuration;
  }
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            }

        }
        log.debug("Input all set");

        XBayaConfiguration conf = null;
        try {
            conf = getConfiguration(configurations);
            conf.setTopic(topic);
            conf.setRunWithCrossProduct(true);
        } catch (URISyntaxException e1) {
            throw new WorkflowRuntimeException(e1);
        }
        WorkflowInterpretorEventListener listener = null;
        WorkflowInterpreter interpreter = null;
        AiravataAPI airavataAPI = AiravataAPIFactory.getAPI(gatewayId, username);
    WorkflowInterpreterConfiguration workflowInterpreterConfiguration = new WorkflowInterpreterConfiguration(workflow,topic,conf.getMessageBoxURL(), conf.getBrokerURL(), airavataAPI, conf, null, null);
        workflowInterpreterConfiguration.setGfacEmbeddedMode(gfacEmbeddedMode);
        workflowInterpreterConfiguration.setActOnProvenance(provenance);

        if (builder.getSecurityContext().getAmazonWebservices() != null) {
            workflowInterpreterConfiguration.setAwsSecretKey(builder.getSecurityContext().getAmazonWebservices().getSecretAccessKey());
            workflowInterpreterConfiguration.setAwsAccessKey(builder.getSecurityContext().getAmazonWebservices().getAccessKeyId());
        }
        // WorkflowInterpreter object should create prior creation of Listener, because listener needs the threadlocal variable
        interpreter = new WorkflowInterpreter(workflowInterpreterConfiguration, getInteractor());
        listener = new WorkflowInterpretorEventListener(workflow, conf);
        try {
          log.debug("start listener set");
            listener.start();
        } catch (MonitorException e1) {
            e1.printStackTrace();
        }

        WorkflowContextHeaderBuilder.setCurrentContextHeader(builder.getContextHeader());

        final WorkflowInterpretorEventListener finalListener = listener;
        conf.setAiravataAPI(getAiravataAPI());
      
        final WorkflowInterpreter finalInterpreter = interpreter;
//        interpreter.setActOnProvenance(provenance);
        interpreter.setProvenanceWriter(runner);
        final String experimentId = topic;
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//            }
        }
    }

    public  XBayaConfiguration getConfiguration(Map<String,String> vals) throws URISyntaxException {
    XBayaConfiguration configuration = new XBayaConfiguration();
    configuration.setBrokerURL(new URI(findValue(vals, BROKER, XBayaConstants.DEFAULT_BROKER_URL.toString())));
    configuration.setGFacURL(new URI(findValue(vals, GFAC, XBayaConstants.DEFAULT_GFAC_URL.toString())));
    configuration.setMessageBoxURL(new URI(findValue(vals, MSGBOX, XBayaConstants.DEFAULT_MESSAGE_BOX_URL.toString())));
    configuration.setMyProxyLifetime(XBayaConstants.DEFAULT_MYPROXY_LIFTTIME);
    configuration.setMyProxyPort(XBayaConstants.DEFAULT_MYPROXY_PORT);
        //This null check will fix some test failures
        if (WorkflowInterpretorSkeleton.configurationContext != null) {
            configuration.setMyProxyServer(findValue(vals, MYPROXY_SERVER, (String) WorkflowInterpretorSkeleton.configurationContext.getProperty(MYPROXY_SERVER)));
            configuration.setMyProxyPassphrase(findValue(vals, MYPROXY_PASS, (String) WorkflowInterpretorSkeleton.configurationContext.getProperty(MYPROXY_PASS)));
            configuration.setMyProxyUsername(findValue(vals, MYPROXY_USER, (String) WorkflowInterpretorSkeleton.configurationContext.getProperty(MYPROXY_USER)));
            configuration.setTrustedCertLocation(findValue(vals, TRUSTED_CERT_LOCATION, (String) WorkflowInterpretorSkeleton.configurationContext.getProperty(TRUSTED_CERT_LOCATION)));
            configuration.setTrustedCertLocation(findValue(vals, MYPROXY_LIFETIME, (String) WorkflowInterpretorSkeleton.configurationContext.getProperty(MYPROXY_LIFETIME)));
        }
    return configuration;
  }
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        }
        this.parameterPanel.layout(inputNodes.size(), 3, GridPanel.WEIGHT_NONE, 2);
//        this.instanceNameTextField.setText(workflow.getName()+"_"+Calendar.getInstance().getTime().toString());
        this.topicTextField.setText(UUID.randomUUID().toString());

        XBayaConfiguration config = this.engine.getConfiguration();
        this.gfacTextField.setText(config.getGFacURL().toString());
        URI workflowInterpreterURL = config.getWorkflowInterpreterURL();
        if (null != workflowInterpreterURL) {
            this.workflowInterpreterTextField.setText(workflowInterpreterURL.toString());
        } else {
            this.workflowInterpreterTextField.setText(XBayaConstants.DEFAULT_WORKFLOW_INTERPRETER_URL);
        }

        AiravataAPI airavataAPI = config.getAiravataAPI();
        if (null != airavataAPI) {
            this.RegistryTextField.setText(config.getRegistryURL());
        } else {
            this.RegistryTextField.setText(XBayaConstants.REGISTRY_URL.toASCIIString());
        }

        this.dialog.show();
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    public void testScheduleDynamically() throws IOException, URISyntaxException, WorkflowException {
        logger.info("Running WorkflowTest...");
        URL systemResource = this.getClass().getClassLoader().getSystemResource("SimpleEcho.xwf");
        Workflow workflow = new Workflow(WorkflowTestUtils.readWorkflow(systemResource));
        ((InputNode) workflow.getGraph().getNode("input")).setDefaultValue("1");
        XBayaConfiguration conf = WorkflowTestUtils.getConfiguration();
        AiravataRegistry registry = conf.getJcrComponentRegistry()==null? null:conf.getJcrComponentRegistry().getRegistry();
    WorkflowInterpreterConfiguration workflowInterpreterConfiguration = new WorkflowInterpreterConfiguration(workflow, UUID.randomUUID().toString(),conf.getMessageBoxURL(), conf.getBrokerURL(), registry, conf, null,null,null,true);
    workflowInterpreterConfiguration.setNotifier(new StandaloneNotificationSender(workflowInterpreterConfiguration.getTopic(),workflowInterpreterConfiguration.getWorkflow()));
        SSWorkflowInterpreterInteractorImpl ssWorkflowInterpreterInteractorImpl = new SSWorkflowInterpreterInteractorImpl();

        WorkflowInterpreter interpretor = new WorkflowInterpreter(workflowInterpreterConfiguration, ssWorkflowInterpreterInteractorImpl);
        interpretor.scheduleDynamically();
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    @Test
    public void testScheduleDynamically() throws IOException, URISyntaxException, WorkflowException {
        logger.info("Running ComplexMathWorkflowTest...");
        URL systemResource = this.getClass().getClassLoader().getSystemResource("ComplexMath.xwf");
        Workflow workflow = new Workflow(WorkflowTestUtils.readWorkflow(systemResource));
        XBayaConfiguration conf = WorkflowTestUtils.getConfiguration();
        AiravataRegistry registry = conf.getJcrComponentRegistry()==null? null:conf.getJcrComponentRegistry().getRegistry();
    WorkflowInterpreterConfiguration workflowInterpreterConfiguration = new WorkflowInterpreterConfiguration(workflow, UUID.randomUUID().toString(),conf.getMessageBoxURL(), conf.getBrokerURL(), registry, conf, null,null,null,true);
    workflowInterpreterConfiguration.setNotifier(new StandaloneNotificationSender(workflowInterpreterConfiguration.getTopic(),workflowInterpreterConfiguration.getWorkflow()));
        SSWorkflowInterpreterInteractorImpl ssWorkflowInterpreterInteractorImpl = new SSWorkflowInterpreterInteractorImpl();
        WorkflowInterpreter interpretor = new WorkflowInterpreter(workflowInterpreterConfiguration,ssWorkflowInterpreterInteractorImpl);
        interpretor.scheduleDynamically();
    }
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        return getWorkflow(new QName(XBayaConstants.LEAD_NS, name));
    }

    public void main() {

        XBayaConfiguration config = new XBayaConfiguration();
        config.setMyProxyServer("myproxy.teragrid.org");
        config.setMyProxyUsername("USER");
        config.setMyProxyPassphrase("PASSWORD");

        new XBayaEngine(config);
    }
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Related Classes of org.apache.airavata.xbaya.XBayaConfiguration

  • org.apache.airavata.api.Airavata.Client
  • org.apache.airavata.workflow.model.component.registry.JCRComponentRegistry
  • org.apache.airavata.xbaya.component.gui.JCRRegistryWindow
  • org.apache.airavata.xbaya.experiment.gui.WorkflowInterpreterLaunchWindow
  • org.apache.airavata.xbaya.gridchem.gui.GridChemRunnerWindow
  • org.apache.airavata.xbaya.gui.XBayaGUI
  • org.apache.airavata.xbaya.interpreter.ComplexForEachWorkflowTest
  • org.apache.airavata.xbaya.interpreter.ComplexMathWorkflowTest
  • org.apache.airavata.xbaya.interpreter.CrossProductWorkflowTest
  • org.apache.airavata.xbaya.interpreter.ForEachWorkflowTest
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