Package org.apache.airavata.registry.api.workflow

Examples of org.apache.airavata.registry.api.workflow.ExperimentData

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    protected void verifyOutput(String experimentId, String outputVerifyingString) throws Exception {
        AiravataAPI airavataAPI = AiravataAPIFactory.getAPI(new URI(getRegistryURL()), getGatewayName(), getUserName(),
                new PasswordCallbackImpl());
        log.info("Experiment ID Returned : " + experimentId);

        ExperimentData experimentData = airavataAPI.getProvenanceManager().getExperimentData(experimentId);

        log.info("Verifying output ...");

        List<WorkflowExecutionDataImpl> workflowInstanceData = experimentData.getWorkflowExecutionDataList();

        Assert.assertFalse("Workflow instance data cannot be empty !", workflowInstanceData.isEmpty());

        for (WorkflowExecutionDataImpl data : workflowInstanceData) {
            List<NodeExecutionData> nodeDataList = data.getNodeDataList();
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        String result = airavataAPI.getExecutionManager().runExperiment(workflowName, workflowInputs);

        System.out.println("Experiment ID Returned : " + result);
        MonitorWorkflow.monitor(result);
        airavataAPI.getExecutionManager().waitForExperimentTermination(result);
        ExperimentData experimentData = airavataAPI.getProvenanceManager().getExperimentData(result);
        List<WorkflowExecutionDataImpl> workflowInstanceData = experimentData.getWorkflowExecutionDataList();
        System.out.println("Experiment Results");
        System.out.println("==================");
        for (WorkflowExecutionDataImpl executionDataImpl : workflowInstanceData) {
      System.out.println("    Instnace ID :" +executionDataImpl.getId()+" ["+executionDataImpl.getTemplateName()+"]");
      List<NodeExecutionData> nodeDataList = executionDataImpl.getNodeDataList();
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            logger.error(response.getEntity(String.class));
            throw new RuntimeException("Failed : HTTP error code : "
                    + status);
        }

        ExperimentData experimentData = response.getEntity(ExperimentDataImpl.class);
        return experimentData;
    }
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            logger.error(response.getEntity(String.class));
            throw new RuntimeException("Failed : HTTP error code : "
                    + status);
        }

        ExperimentData experimentData = response.getEntity(ExperimentData.class);
        return experimentData;
    }
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            logger.error(response.getEntity(String.class));
            throw new RuntimeException("Failed : HTTP error code : "
                    + status);
        }

        ExperimentData experimentData = response.getEntity(ExperimentDataImpl.class);
        return experimentData;
    }
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            logger.error(response.getEntity(String.class));
            throw new RuntimeException("Failed : HTTP error code : "
                    + status);
        }

        ExperimentData experimentData = response.getEntity(ExperimentData.class);
        return experimentData;
    }
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    protected void verifyOutput(String experimentId, String outputVerifyingString) throws Exception {
        AiravataAPI airavataAPI = AiravataAPIFactory.getAPI(new URI(getRegistryURL()), getGatewayName(), getUserName(),
                new PasswordCallbackImpl());
        log.info("Experiment ID Returned : " + experimentId);

        ExperimentData experimentData = airavataAPI.getProvenanceManager().getExperimentData(experimentId);

        log.info("Verifying output ...");

        List<WorkflowExecutionDataImpl> workflowInstanceData = experimentData.getWorkflowExecutionDataList();

        Assert.assertFalse("Workflow instance data cannot be empty !", workflowInstanceData.isEmpty());

        for (WorkflowExecutionDataImpl data : workflowInstanceData) {
            List<NodeExecutionData> nodeDataList = data.getNodeDataList();
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    protected void verifyOutput(String experimentId, String outputVerifyingString) throws Exception {
        AiravataAPI airavataAPI = AiravataAPIFactory.getAPI(new URI(getRegistryURL()), getGatewayName(), getUserName(),
                new PasswordCallbackImpl());
        log.info("Experiment ID Returned : " + experimentId);

        ExperimentData experimentData = airavataAPI.getProvenanceManager().getExperimentData(experimentId);

        log.info("Verifying output ...");

        List<WorkflowExecutionDataImpl> workflowInstanceData = experimentData.getWorkflowExecutionDataList();

        Assert.assertFalse("Workflow instance data cannot be empty !", workflowInstanceData.isEmpty());

        for (WorkflowExecutionDataImpl data : workflowInstanceData) {
            List<NodeExecutionData> nodeDataList = data.getNodeDataList();
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        this.node = node;
  }

    public Object read() throws Exception {
        try {
            ExperimentData workflowExecution = registry.getExperiment(experimentId);
            List<WorkflowInstanceNodeData> nodeDataList = workflowExecution.getWorkflowInstanceData().get(0).getNodeDataList();
            if (nodeDataList.size() == 0) {
                return null;
            }
            for (WorkflowInstanceNodeData data : nodeDataList) {
                if (this.node.getID().equals(data.getWorkflowInstanceNode().getNodeId())) {
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      throws RegistryException {
    if (!isExperimentExists(experimentId)){
      throw new ExperimentDoesNotExistsException(experimentId);
    }
        ExperimentDataRetriever experimentDataRetriever = new ExperimentDataRetriever();
        ExperimentData experimentData =  experimentDataRetriever.getExperiment(experimentId);
        return experimentDataRetriever.getExperiment(experimentId);
  }
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Related Classes of org.apache.airavata.registry.api.workflow.ExperimentData

  • org.apache.airavata.client.samples.RunWorkflow
  • org.apache.airavata.integration.BaseCaseIT
  • org.apache.airavata.integration.ForEachCaseIT
  • org.apache.airavata.integration.WorkflowIntegrationTestBase
  • org.apache.airavata.integration.WorkflowSamplesCaseIT
  • org.apache.airavata.persistance.registry.jpa.impl.AiravataJPARegistry
  • org.apache.airavata.rest.client.ProvenanceResourceClient
  • org.apache.airavata.xbaya.provenance.ProvenanceReader
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