Package org.apache.airavata.model.workspace.experiment

Examples of org.apache.airavata.model.workspace.experiment.ComputationalResourceScheduling

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                }
            }
            jobDescriptor.setOwner(((PBSCluster) cluster).getServerInfo().getUserName());
            TaskDetails taskData = jobExecutionContext.getTaskData();
            if (taskData != null && taskData.isSetTaskScheduling()) {
                ComputationalResourceScheduling computionnalResource = taskData.getTaskScheduling();
                if (computionnalResource.getNodeCount() > 0) {
                    jobDescriptor.setNodes(computionnalResource.getNodeCount());
                }
                if (computionnalResource.getComputationalProjectAccount() != null) {
                    jobDescriptor.setAcountString(computionnalResource.getComputationalProjectAccount());
                }
                if (computionnalResource.getQueueName() != null) {
                    jobDescriptor.setQueueName(computionnalResource.getQueueName());
                }
                if (computionnalResource.getTotalCPUCount() > 0) {
                    jobDescriptor.setProcessesPerNode(computionnalResource.getTotalCPUCount());
                }
                if (computionnalResource.getWallTimeLimit() > 0) {
                    jobDescriptor.setMaxWallTime(String.valueOf(computionnalResource.getWallTimeLimit()));
                }
            }

        }
        return jobDescriptor;
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                }
            }
            jobDescriptor.setOwner(((PBSCluster) cluster).getServerInfo().getUserName());
            TaskDetails taskData = jobExecutionContext.getTaskData();
            if (taskData != null && taskData.isSetTaskScheduling()) {
                ComputationalResourceScheduling computionnalResource = taskData.getTaskScheduling();
                if (computionnalResource.getNodeCount() > 0) {
                    jobDescriptor.setNodes(computionnalResource.getNodeCount());
                }
                if (computionnalResource.getComputationalProjectAccount() != null) {
                    jobDescriptor.setAcountString(computionnalResource.getComputationalProjectAccount());
                }
                if (computionnalResource.getQueueName() != null) {
                    jobDescriptor.setQueueName(computionnalResource.getQueueName());
                }
                if (computionnalResource.getTotalCPUCount() > 0) {
                    jobDescriptor.setProcessesPerNode(computionnalResource.getTotalCPUCount());
                }
                if (computionnalResource.getWallTimeLimit() > 0) {
                    jobDescriptor.setMaxWallTime(String.valueOf(computionnalResource.getWallTimeLimit()));
                }
            }

        }
        return jobDescriptor;
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        Experiment simpleExperiment =
                ExperimentModelUtil.createSimpleExperiment(projectId, "admin", "echoExperiment", appId, appId, exInputs);
        simpleExperiment.setExperimentOutputs(exOut);

        ComputationalResourceScheduling scheduling = ExperimentModelUtil.createComputationResourceScheduling(hostId, 1, 1, 1, "normal", 1, 0, 1, "sds128");
        scheduling.setResourceHostId(hostId);
        UserConfigurationData userConfigurationData = new UserConfigurationData();
        userConfigurationData.setAiravataAutoSchedule(false);
        userConfigurationData.setOverrideManualScheduledParams(false);
        userConfigurationData.setComputationalResourceScheduling(scheduling);
        simpleExperiment.setUserConfigurationData(userConfigurationData);
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    }


    public static ComputationalResourceScheduling getComputationalResourceScheduling (ComputationSchedulingResource csr){
        if (csr != null){
            ComputationalResourceScheduling scheduling = new ComputationalResourceScheduling();
            scheduling.setResourceHostId(csr.getResourceHostId());
            scheduling.setTotalCPUCount(csr.getCpuCount());
            scheduling.setNodeCount(csr.getNodeCount());
            scheduling.setNumberOfThreads(csr.getNumberOfThreads());
            scheduling.setQueueName(csr.getQueueName());
            scheduling.setWallTimeLimit(csr.getWalltimeLimit());
            scheduling.setJobStartTime((int)csr.getJobStartTime().getTime());
            scheduling.setTotalPhysicalMemory(csr.getPhysicalMemory());
            scheduling.setComputationalProjectAccount(csr.getProjectName());
            return scheduling;
        }
        return null;
    }
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        Experiment simpleExperiment =
                ExperimentModelUtil.createSimpleExperiment(projectId, user, "echoExperiment", "SimpleEcho0", "SimpleEcho0", exInputs);
        simpleExperiment.setExperimentOutputs(exOut);

        ComputationalResourceScheduling scheduling = ExperimentModelUtil.createComputationResourceScheduling("localhost", 1, 1, 1, "normal", 0, 0, 1, "sds128");
        scheduling.setResourceHostId("localhost");
        UserConfigurationData userConfigurationData = new UserConfigurationData();
        userConfigurationData.setAiravataAutoSchedule(false);
        userConfigurationData.setOverrideManualScheduledParams(false);
        userConfigurationData.setComputationalResourceScheduling(scheduling);
        simpleExperiment.setUserConfigurationData(userConfigurationData);
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        Experiment simpleExperiment =
                ExperimentModelUtil.createSimpleExperiment(projectId, user, "echoExperiment", "SimpleEcho0", "SimpleEcho0", exInputs);
        simpleExperiment.setExperimentOutputs(exOut);

        ComputationalResourceScheduling scheduling = ExperimentModelUtil.createComputationResourceScheduling("localhost", 1, 1, 1, "normal", 0, 0, 1, "sds128");
        scheduling.setResourceHostId("localhost");
        UserConfigurationData userConfigurationData = new UserConfigurationData();
        userConfigurationData.setAiravataAutoSchedule(false);
        userConfigurationData.setOverrideManualScheduledParams(false);
        userConfigurationData.setComputationalResourceScheduling(scheduling);
        simpleExperiment.setUserConfigurationData(userConfigurationData);
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                }
            }
            jobDescriptor.setOwner(((PBSCluster) cluster).getServerInfo().getUserName());
            TaskDetails taskData = jobExecutionContext.getTaskData();
            if (taskData != null && taskData.isSetTaskScheduling()) {
                ComputationalResourceScheduling computionnalResource = taskData.getTaskScheduling();
                if (computionnalResource.getNodeCount() > 0) {
                    jobDescriptor.setNodes(computionnalResource.getNodeCount());
                }
                if (computionnalResource.getComputationalProjectAccount() != null) {
                    jobDescriptor.setAcountString(computionnalResource.getComputationalProjectAccount());
                }
                if (computionnalResource.getQueueName() != null) {
                    jobDescriptor.setQueueName(computionnalResource.getQueueName());
                }
                if (computionnalResource.getTotalCPUCount() > 0) {
                    jobDescriptor.setProcessesPerNode(computionnalResource.getTotalCPUCount());
                }
                if (computionnalResource.getWallTimeLimit() > 0) {
                    jobDescriptor.setMaxWallTime(String.valueOf(computionnalResource.getWallTimeLimit()));
                }
            }

        }
        return jobDescriptor;
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                }
            }
            jobDescriptor.setOwner(((PBSCluster) cluster).getServerInfo().getUserName());
            TaskDetails taskData = jobExecutionContext.getTaskData();
            if (taskData != null && taskData.isSetTaskScheduling()) {
                ComputationalResourceScheduling computionnalResource = taskData.getTaskScheduling();
                if (computionnalResource.getNodeCount() > 0) {
                    jobDescriptor.setNodes(computionnalResource.getNodeCount());
                }
                if (computionnalResource.getComputationalProjectAccount() != null) {
                    jobDescriptor.setAcountString(computionnalResource.getComputationalProjectAccount());
                }
                if (computionnalResource.getQueueName() != null) {
                    jobDescriptor.setQueueName(computionnalResource.getQueueName());
                }
                if (computionnalResource.getTotalCPUCount() > 0) {
                    jobDescriptor.setProcessesPerNode(computionnalResource.getTotalCPUCount());
                }
                if (computionnalResource.getWallTimeLimit() > 0) {
                    jobDescriptor.setMaxWallTime(String.valueOf(computionnalResource.getWallTimeLimit()));
                }
            }

        }
        return jobDescriptor;
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        String projectId = getClient().createProject(project);

        Experiment simpleExperiment = ExperimentModelUtil.createSimpleExperiment(projectId, "admin", "echoExperiment", "SimpleEcho2", "SimpleEcho2", exInputs);
        simpleExperiment.setExperimentOutputs(exOut);

        ComputationalResourceScheduling scheduling = ExperimentModelUtil.createComputationResourceScheduling("trestles.sdsc.edu", 1, 1, 1, "normal", 0, 0, 1, "sds128");
        scheduling.setResourceHostId("gsissh-trestles");
        UserConfigurationData userConfigurationData = new UserConfigurationData();
        userConfigurationData.setAiravataAutoSchedule(false);
        userConfigurationData.setOverrideManualScheduledParams(false);
        userConfigurationData.setComputationalResourceScheduling(scheduling);
        simpleExperiment.setUserConfigurationData(userConfigurationData);
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        String projectId = getClient().createProject(project);

        Experiment simpleExperiment = ExperimentModelUtil.createSimpleExperiment(projectId, "admin", "echoExperiment", "SimpleEcho3", "SimpleEcho3", exInputs);
        simpleExperiment.setExperimentOutputs(exOut);

        ComputationalResourceScheduling scheduling = ExperimentModelUtil.createComputationResourceScheduling("stampede.tacc.xsede.org", 1, 1, 1, "normal", 0, 0, 1, "TG-STA110014S");
        scheduling.setResourceHostId("stampede-host");
        UserConfigurationData userConfigurationData = new UserConfigurationData();
        userConfigurationData.setAiravataAutoSchedule(false);
        userConfigurationData.setOverrideManualScheduledParams(false);
        userConfigurationData.setComputationalResourceScheduling(scheduling);
        simpleExperiment.setUserConfigurationData(userConfigurationData);
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  • org.apache.airavata.gfac.gsissh.util.GFACGSISSHUtils
  • org.apache.airavata.gfac.ssh.util.GFACSSHUtils
  • org.apache.airavata.integration.BaseCaseIT
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