Examples of org.apache.airavata.model.appcatalog.appdeployment.ApplicationDeploymentDescription$ApplicationDeploymentDescriptionStandardScheme

Package org.apache.airavata.model.appcatalog.appdeployment

Examples of org.apache.airavata.model.appcatalog.appdeployment.ApplicationDeploymentDescription$ApplicationDeploymentDescriptionStandardScheme

org.apache.airavata.model.appcatalog.appdeployment.ApplicationDeploymentDescription
Application Deployment Description appDeploymentId: Airavata Internal Unique Job ID. This is set by the registry. appModuleName: Application Module Name. This has to be precise describing the binary. computeHostId: This ID maps application deployment to a particular resource previously described within Airavata. Example: Stampede is first registered and refered when registering WRF. moduleLoadCmd: Command string to load modules. This will be placed in the job submisison Ex: module load amber libPrependPaths: prepend to a path variable the value libAppendPaths: append to a path variable the value setEnvironment: assigns to the environment variable "NAME" the value

        application.addToApplicationInputs(DocumentCreatorUtils.createAppInput("echo_input", "echo_input", "Echo Input Data", null, DataType.STRING));
        application.addToApplicationOutputs(DocumentCreatorUtils.createAppOutput("echo_output", null, DataType.STRING));
        application.setApplicationInterfaceId(client.registerApplicationInterface(application));


        //Define application deployment
        ApplicationDeploymentDescription deployment = DocumentCreatorUtils.createApplicationDeployment(host.getComputeResourceId(), module.getAppModuleId(), "/bin/echo", ApplicationParallelismType.SERIAL, "Local echo app depoyment");
        deployment.setAppDeploymentId(client.registerApplicationDeployment(deployment));


        //Define gateway profile
        ComputeResourcePreference computeResourcePreference = DocumentCreatorUtils.createComputeResourcePreference(
                host.getComputeResourceId(), "/tmp", null,
                false, null,

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        ApplicationModule module = DocumentCreatorUtils.createApplicationModule("echo", "1.1", null);
        module.setAppModuleId(client.registerApplicationModule(module));
        ;


        ApplicationDeploymentDescription deployment = DocumentCreatorUtils.createApplicationDeployment(host.getComputeResourceId(), module.getAppModuleId(), "/bin/echo", ApplicationParallelismType.SERIAL, "SSHEchoApplication");
        client.registerApplicationDeployment(deployment);


        ApplicationInterfaceDescription application = new ApplicationInterfaceDescription();
//      application.setIsEmpty(false);
        application.setApplicationName("SSHEcho1");

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        application.addToApplicationInputs(DocumentCreatorUtils.createAppInput("echo_input", "echo_input", "echo_input", null, DataType.STRING));
        application.addToApplicationOutputs(DocumentCreatorUtils.createAppOutput("echo_output", null, DataType.STRING));


        application.setApplicationInterfaceId(client.registerApplicationInterface(application));


        ApplicationDeploymentDescription deployment = DocumentCreatorUtils.createApplicationDeployment(host.getComputeResourceId(), module1.getAppModuleId(), "/bin/echo", ApplicationParallelismType.SERIAL, "Echo application");
        deployment.setAppDeploymentId(client.registerApplicationDeployment(deployment));


        client.addGatewayComputeResourcePreference(getGatewayResourceProfile().getGatewayID(), host.getComputeResourceId(), DocumentCreatorUtils.createComputeResourcePreference(host.getComputeResourceId(), "/oasis/scratch/trestles/ogce/temp_project/", "sds128", false, null, null, null));
        return host.getComputeResourceId() + "," + application.getApplicationInterfaceId();
    }

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        application2.addToApplicationOutputs(DocumentCreatorUtils.createAppOutput("WRF_Output", null, DataType.URI));
        application2.addToApplicationOutputs(DocumentCreatorUtils.createAppOutput("WRF_Execution_Log", null, DataType.URI));
        application2.setApplicationInterfaceId(client.registerApplicationInterface(application2));


        ApplicationDeploymentDescription deployment2 = DocumentCreatorUtils.createApplicationDeployment(host.getComputeResourceId(), module2.getAppModuleId(), "/home/ogce/production/app_wrappers/wrf_wrapper.sh", ApplicationParallelismType.MPI, "WRF");
        deployment2.setAppDeploymentId(client.registerApplicationDeployment(deployment2));
        return host.getComputeResourceId() + "," + application2.getApplicationInterfaceId();
    }

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        application2.addToApplicationOutputs(DocumentCreatorUtils.createAppOutput("WRF_Output", null, DataType.URI));
        application2.addToApplicationOutputs(DocumentCreatorUtils.createAppOutput("WRF_Execution_Log", null, DataType.URI));
        application2.setApplicationInterfaceId(client.registerApplicationInterface(application2));


        ApplicationDeploymentDescription deployment2 = DocumentCreatorUtils.createApplicationDeployment(host.getComputeResourceId(), module2.getAppModuleId(), "/home1/01437/ogce/production/app_wrappers/wrf_wrapper.sh", ApplicationParallelismType.MPI, "WRF");
        deployment2.setAppDeploymentId(client.registerApplicationDeployment(deployment2));
        return host.getComputeResourceId() + "," + application2.getApplicationInterfaceId();


    }

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        application.addToApplicationModules(module.getAppModuleId());
        application.addToApplicationInputs(DocumentCreatorUtils.createAppInput("echo_input", "echo_input", null, null, DataType.STRING));
        application.addToApplicationOutputs(DocumentCreatorUtils.createAppOutput("echo_output", null, DataType.STRING));
        application.setApplicationInterfaceId(client.registerApplicationInterface(application));


        ApplicationDeploymentDescription deployment = DocumentCreatorUtils.createApplicationDeployment(host.getComputeResourceId(), module.getAppModuleId(), "/bin/echo", ApplicationParallelismType.SERIAL, "EchoLocal");
        deployment.setAppDeploymentId(client.registerApplicationDeployment(deployment));


        client.addGatewayComputeResourcePreference(getGatewayResourceProfile().getGatewayID(), host.getComputeResourceId(), DocumentCreatorUtils.createComputeResourcePreference(host.getComputeResourceId(), "/home1/01437/ogce", "TG-STA110014S", false, null, null, null));
        return host.getComputeResourceId() + "," + application.getApplicationInterfaceId();
    }

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        application.addToApplicationModules(module.getAppModuleId());
        application.addToApplicationInputs(DocumentCreatorUtils.createAppInput("echo_input", "echo_input", null, null, DataType.STRING));
        application.addToApplicationOutputs(DocumentCreatorUtils.createAppOutput("echo_output", null, DataType.STRING));
        application.setApplicationInterfaceId(client.registerApplicationInterface(application));


        ApplicationDeploymentDescription deployment = DocumentCreatorUtils.createApplicationDeployment(host.getComputeResourceId(), module.getAppModuleId(), "/bin/echo", ApplicationParallelismType.SERIAL, "EchoLocal");
        deployment.setAppDeploymentId(client.registerApplicationDeployment(deployment));


        client.addGatewayComputeResourcePreference(getGatewayResourceProfile().getGatewayID(), host.getComputeResourceId(), DocumentCreatorUtils.createComputeResourcePreference(host.getComputeResourceId(), "/home1/01437/ogce", "TG-STA110014S", false, null, null, null));
        return host.getComputeResourceId() + "," + application.getApplicationInterfaceId();
    }

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        application.addToApplicationModules(module.getAppModuleId());
        application.addToApplicationInputs(DocumentCreatorUtils.createAppInput("echo_input", "echo_input", null, null, DataType.STRING));
        application.addToApplicationOutputs(DocumentCreatorUtils.createAppOutput("echo_output", null, DataType.STRING));
        application.setApplicationInterfaceId(client.registerApplicationInterface(application));


        ApplicationDeploymentDescription deployment = DocumentCreatorUtils.createApplicationDeployment(host.getComputeResourceId(), module.getAppModuleId(), "/N/u/lginnali/BigRed2/myjob/test.sh", ApplicationParallelismType.SERIAL, "EchoLocal");
        deployment.setAppDeploymentId(client.registerApplicationDeployment(deployment));


        String date = (new Date()).toString();
        date = date.replaceAll(" ", "_");
        date = date.replaceAll(":", "_");
        String tempDir = "/N/u/lginnali/BigRed2/myjob";

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        application.addToApplicationOutputs(DocumentCreatorUtils.createAppOutput("AMBER_Prod.mdcrd", null, DataType.URI));
        application.addToApplicationOutputs(DocumentCreatorUtils.createAppOutput("AMBER_Prod.out", null, DataType.URI));
        application.addToApplicationOutputs(DocumentCreatorUtils.createAppOutput("AMBER_Prod.rst", null, DataType.URI));
        application.setApplicationInterfaceId(client.registerApplicationInterface(application));


        ApplicationDeploymentDescription deployment = DocumentCreatorUtils.createApplicationDeployment(host.getComputeResourceId(), amodule.getAppModuleId(), "/N/u/cgateway/BigRed2/sandbox/amber_wrapper.sh", ApplicationParallelismType.SERIAL, "AmberBR2");
        deployment.setAppDeploymentId(client.registerApplicationDeployment(deployment));




        String date = (new Date()).toString();
        date = date.replaceAll(" ", "_");
        date = date.replaceAll(":", "_");

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        application.addToApplicationOutputs(DocumentCreatorUtils.createAppOutput("AMBER_Prod.mdcrd", null, DataType.URI));
        application.addToApplicationOutputs(DocumentCreatorUtils.createAppOutput("AMBER_Prod.out", null, DataType.URI));
        application.addToApplicationOutputs(DocumentCreatorUtils.createAppOutput("AMBER_Prod.rst", null, DataType.URI));
        application.setApplicationInterfaceId(client.registerApplicationInterface(application));


        ApplicationDeploymentDescription deployment = DocumentCreatorUtils.createApplicationDeployment(host.getComputeResourceId(), amodule.getAppModuleId(), "/home1/01437/ogce/production/app_wrappers/amber_wrapper.sh", ApplicationParallelismType.SERIAL, "AmberStampede");
        deployment.setAppDeploymentId(client.registerApplicationDeployment(deployment));


        client.addGatewayComputeResourcePreference(getGatewayResourceProfile().getGatewayID(), host.getComputeResourceId(), DocumentCreatorUtils.createComputeResourcePreference(host.getComputeResourceId(), "/home1/01437/ogce", "TG-STA110014S", false, null, null, null));




        return host.getComputeResourceId() + "," + application.getApplicationInterfaceId();

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