Package org.apache.airavata.client.api

Examples of org.apache.airavata.client.api.ExperimentAdvanceOptions

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                      InputNode inputNode = inputNodes.get(i);
                      workflowInputs.add(new WorkflowInput(inputNode.getID(), inputNode.getDefaultValue().toString()));
                    }
                    AiravataAPI api = engine.getConfiguration().getAiravataAPI();
                   
                    ExperimentAdvanceOptions options = api.getExecutionManager().createExperimentAdvanceOptions(instanceNameFinal, api.getCurrentUser(), null);
                    if (AmazonCredential.getInstance().getAwsAccessKeyId() != null) {
                        options.getCustomSecuritySettings().getAmazonWSSettings().setAccessKeyId(AmazonCredential.getInstance().getAwsAccessKeyId());
                        options.getCustomSecuritySettings().getAmazonWSSettings().setSecretAccessKey(AmazonCredential.getInstance().getAwsSecretAccessKey());
                    }

                    //TODO get the token id from UI
                    // For the moment hard code it
                    // TODO Build UI to get the token id
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    protected void runWorkFlow(Workflow workflow, List<String> inputValues, Object outputValue) throws Exception {
        AiravataAPI airavataAPI = AiravataAPIFactory.getAPI(new URI(getRegistryURL()), getGatewayName(), getUserName(),
                new PasswordCallbackImpl());
        List<WorkflowInput> workflowInputs = setupInputs(workflow, inputValues);
        String workflowName = workflow.getName();
        ExperimentAdvanceOptions options = airavataAPI.getExecutionManager().createExperimentAdvanceOptions(
                workflowName, getUserName(), null);

        String experimentId = airavataAPI.getExecutionManager().runExperiment(workflowName, workflowInputs, options);

        Assert.assertNotNull(experimentId);
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    protected void runWorkFlow(Workflow workflow, List<String> inputValues, List<String> outputValue) throws Exception {
        AiravataAPI airavataAPI = AiravataAPIFactory.getAPI(new URI(getRegistryURL()), getGatewayName(), getUserName(),
                new PasswordCallbackImpl());
        List<WorkflowInput> workflowInputs = setupInputs(workflow, inputValues);
        String workflowName = workflow.getName();
        ExperimentAdvanceOptions options = airavataAPI.getExecutionManager().createExperimentAdvanceOptions(
                workflowName, getUserName(), null);

        String experimentId = airavataAPI.getExecutionManager().runExperiment(workflowName, workflowInputs, options);

        Assert.assertNotNull(experimentId);
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        AiravataAPI airavataAPI = AiravataAPIFactory.getAPI(new URI(getRegistryURL()), getGatewayName(), getUserName(),
                new PasswordCallbackImpl());
        List<WorkflowInput> workflowInputs = setupInputs(workflow, inputValues);
        String workflowName = workflow.getName();
        ExperimentAdvanceOptions options = airavataAPI.getExecutionManager().createExperimentAdvanceOptions(
                workflowName, getUserName(), null);

        options.getCustomSecuritySettings().getCredentialStoreSecuritySettings().setTokenId("1234");

        String experimentId = airavataAPI.getExecutionManager().runExperiment(workflowName, workflowInputs, options);

        Assert.assertNotNull(experimentId);
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        AiravataAPI airavataAPI = AiravataAPIFactory.getAPI(new URI(getRegistryURL()), getGatewayName(), getUserName(),
                new PasswordCallbackImpl());
        List<WorkflowInput> workflowInputs = setupInputs(workflow, inputValues);
        String workflowName = workflow.getName();
        ExperimentAdvanceOptions options = airavataAPI.getExecutionManager().createExperimentAdvanceOptions(
                workflowName, getUserName(), null);
        String experimentId = airavataAPI.getExecutionManager().runExperiment(workflowName, workflowInputs, options,
                new EventDataListenerAdapter() {
                    public void notify(EventDataRepository eventDataRepo, EventData eventData) {
                        // do nothing
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        AiravataAPI airavataAPI = AiravataAPIFactory.getAPI(new URI(getRegistryURL()), getGatewayName(), getUserName(),
                new PasswordCallbackImpl());
        List<WorkflowInput> workflowInputs = setupInputs(workflow, inputValues);
        String workflowName = workflow.getName();
        ExperimentAdvanceOptions options = airavataAPI.getExecutionManager().createExperimentAdvanceOptions(
                workflowName, getUserName(), null);

        options.getCustomSecuritySettings().getCredentialStoreSecuritySettings().setTokenId("1234");

        String experimentId = airavataAPI.getExecutionManager().runExperiment(workflowName, workflowInputs, options);

        Assert.assertNotNull(experimentId);
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        AiravataAPI airavataAPI = AiravataAPIFactory.getAPI(new URI(getRegistryURL()), getGatewayName(), getUserName(),
                new PasswordCallbackImpl());
        List<WorkflowInput> workflowInputs = setupInputs(workflow, inputValues);
        String workflowName = workflow.getName();
        ExperimentAdvanceOptions options = airavataAPI.getExecutionManager().createExperimentAdvanceOptions(
                workflowName, getUserName(), null);
        String experimentId = airavataAPI.getExecutionManager().runExperiment(workflowName, workflowInputs, options,
                new EventDataListenerAdapter() {
                    public void notify(EventDataRepository eventDataRepo, EventData eventData) {
                        // do nothing
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    protected void runWorkFlow(Workflow workflow, List<String> inputValues, List<String> outputValue) throws Exception {
        AiravataAPI airavataAPI = AiravataAPIFactory.getAPI(new URI(getRegistryURL()), getGatewayName(), getUserName(),
                new PasswordCallbackImpl());
        List<WorkflowInput> workflowInputs = setupInputs(workflow, inputValues);
        String workflowName = workflow.getName();
        ExperimentAdvanceOptions options = airavataAPI.getExecutionManager().createExperimentAdvanceOptions(
                workflowName, getUserName(), null);

        String experimentId = airavataAPI.getExecutionManager().runExperiment(workflowName, workflowInputs, options);

        Assert.assertNotNull(experimentId);
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  }

  @Override
  public String runExperiment(String workflowTemplateId,
      List<WorkflowInput> inputs) throws AiravataAPIInvocationException {
    ExperimentAdvanceOptions options = createExperimentAdvanceOptions(workflowTemplateId+"_"+Calendar.getInstance().getTime().toString(), getClient().getCurrentUser(), null);
    return runExperiment(workflowTemplateId, inputs ,options);
  }
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  @Override
  public ExperimentAdvanceOptions createExperimentAdvanceOptions()
      throws AiravataAPIInvocationException {
    return new ExperimentAdvanceOptions();
  }
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Related Classes of org.apache.airavata.client.api.ExperimentAdvanceOptions

  • org.apache.airavata.client.AiravataClient
  • org.apache.airavata.client.impl.ExecutionManagerImpl
  • org.apache.airavata.client.impl.ExecutionManagerThriftImpl
  • org.apache.airavata.client.impl.SecuritySettingsImpl
  • org.apache.airavata.client.impl.WorkflowOutputDataSettingsImpl
  • org.apache.airavata.client.impl.WorkflowSchedulingSettingsImpl
  • org.apache.airavata.integration.BaseCaseIT
  • org.apache.airavata.integration.ForEachCaseIT
  • org.apache.airavata.integration.WorkflowIntegrationTestBase
  • org.apache.airavata.integration.WorkflowSamplesCaseIT
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