Examples of OrderedMatcherFactory

Examples of bgu.bio.algorithms.graphs.hsa.matchers.OrderedMatcherFactory

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    smooth.calculateCost(s);

    double ans1 = 0, ans2 = 0;

    // reuse
    HSA hsaEngine = new HSA(1, 1, cost, new OrderedMatcherFactory(), true);

    pruneRooted.calculateCost(t);
    pruneRooted.calculateCost(s);
    ans1 = hsaEngine.computeHSA(t, s);
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Examples of bgu.bio.algorithms.graphs.hsa.matchers.OrderedMatcherFactory

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    }
 
    double ans1 = 0, ans2 = 0;

    // reuse
    HSA hsaEngine2 = new HSA(1, 1, cost, new OrderedMatcherFactory(),
        true);
    TIntArrayList[] trace = new TIntArrayList[3];
    ans1 = hsaEngine2.computeHSA(t, t, trace);

    Assert.assertEquals("trace should be the same", trace[0], trace[1]);
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