Examples of OneToOneSelector

net.sourceforge.align.filter.selector.OneToOneSelector
Represents the filter that selects only one to one alignments and removes the rest. @author Jarek Lipski (loomchild)

Examples of net.sourceforge.align.filter.selector.OneToOneSelector

    AlignAlgorithm algorithm = 
      new AdaptiveBandAlgorithm(algorithmFactory, calculator);
    
    filterList.add(new Aligner(algorithm));
    
    filterList.add(new OneToOneSelector());
    
    filterList.add(new FractionSelector(SELECT_FRACTION));
    
    Filter filter = new CompositeFilter(filterList);

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Examples of net.sourceforge.align.filter.selector.OneToOneSelector

    AlignAlgorithm algorithm = 
      new AdaptiveBandAlgorithm(algorithmFactory, calculator);
    
    filterList.add(new Aligner(algorithm));
    
    filterList.add(new OneToOneSelector());
    
    filterList.add(new FractionSelector(SELECT_FRACTION));
    
    Filter filter = new CompositeFilter(filterList);

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Examples of net.sourceforge.align.filter.selector.OneToOneSelector

   * @param alignmentList
   * @return
   */
  private List<Alignment> selectBestAlignments(List<Alignment> alignmentList) {
    List<Filter> filterList = new ArrayList<Filter>();
    filterList.add(new OneToOneSelector());
    filterList.add(new FractionSelector(SELECT_FRACTION));
    Filter filter = new CompositeFilter(filterList);    
    return filter.apply(alignmentList);
  }

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Examples of net.sourceforge.align.filter.selector.OneToOneSelector

      throw new MissingParameterException("class");
    }
    Filter filter;
    
    if (cls.equals("one-to-one")) {
      filter = new OneToOneSelector();
    } else if (cls.equals("fraction")) {
      float fraction = createFloat(commandLine, "fraction");
      filter = new FractionSelector(fraction);
    } else if (cls.equals("probability")) {
      float probability = createFloat(commandLine, "probability");

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