Package net.sourceforge.align.ui.console.command.exception

Examples of net.sourceforge.align.ui.console.command.exception.MissingParameterException

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  private Calculator createCalculator(CommandLine commandLine,
      List<Alignment> alignmentList) {
    String calculatorString = commandLine.getOptionValue('a');
    if (calculatorString == null) {
      throw new MissingParameterException("calculator");
    }
    List<String> calculatorStringList =
      Arrays.asList(calculatorString.split(","));
    return createCalculator(commandLine, alignmentList, calculatorStringList);
  }
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  private Calculator createNormalCalculator(CommandLine commandLine) {
    Counter counter = createCounter(commandLine);
    if (counter == null) {
      throw new MissingParameterException("counter");
    }
    Calculator calculator = new NormalDistributionCalculator(counter);
    return calculator;
  }
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  private Calculator createPoissonCalculator(CommandLine commandLine,
      List<Alignment> alignmentList) {
    Counter counter = createCounter(commandLine);
    if (counter == null) {
      throw new MissingParameterException("counter");
    }
    String lengthCorpus = commandLine.getOptionValue('l');
    List<Alignment> lengthAlignmentList;
    if (lengthCorpus != null) {
      lengthAlignmentList = loadAlignmentList(lengthCorpus);
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  private Calculator createOracleCalculator(CommandLine commandLine,
      Calculator calculator) {
    Calculator resultCalculator;
    String oracleCorpus = commandLine.getOptionValue("oracle-corpus");
    if (oracleCorpus == null) {
      throw new MissingParameterException("oracle-corpus");
    }
    List<Alignment> oracleAlignmentList = loadAlignmentList(oracleCorpus);
    resultCalculator = new MinimumCalculator(new OracleCalculator(oracleAlignmentList),
        calculator, OracleCalculator.DEFAULT_SUCCESS_SCORE);
    return resultCalculator;
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Related Classes of net.sourceforge.align.ui.console.command.exception.MissingParameterException

  • net.sourceforge.align.ui.console.command.AbstractCommand
  • net.sourceforge.align.ui.console.command.AlignCommand
  • net.sourceforge.align.ui.console.command.FormatCommand
  • net.sourceforge.align.ui.console.command.MacroCommand
  • net.sourceforge.align.ui.console.command.ModelCommand
  • net.sourceforge.align.ui.console.command.ModifyCommand
  • net.sourceforge.align.ui.console.command.ParseCommand
  • net.sourceforge.align.ui.console.command.SelectCommand
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