Package net.sf.cram.encoding.read_features

Examples of net.sf.cram.encoding.read_features.DeletionVariationCodec

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  @Override
  public BitCodec<DeletionVariation> buildCodec(CramHeader header,
      CompressionHeader compression,
      SequenceBaseProvider referenceBaseProvider,
      DefaultMutableTreeNode parent) throws CramCompressionException {
    DeletionVariationCodec deletionCodec = new DeletionVariationCodec();
    DefaultMutableTreeNode delNode = buildNode(deletionCodec,
        "Deletion codec");
    parent.add(delNode);

    deletionCodec.dellengthPosCodec = register(
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Related Classes of net.sf.cram.encoding.read_features.DeletionVariationCodec

  • net.sf.cram.encoding.factory.DeletionVariationCodecFactory
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