Package net.schmizz.sshj.xfer.scp

Examples of net.schmizz.sshj.xfer.scp.SCPFileTransfer

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  }
   private static String stageInputFiles(JobExecutionContext context,String paramValue) throws IOException,GFacException{
     ApplicationDeploymentDescriptionType app = context.getApplicationContext().getApplicationDeploymentDescription().getType();

     SSHSecurityContext securityContext = (SSHSecurityContext)context.getSecurityContext(SSHSecurityContext.SSH_SECURITY_CONTEXT);
     SCPFileTransfer fileTransfer = securityContext.getSSHClient().newSCPFileTransfer();
     String remoteFile = app.getInputDataDirectory() + File.separatorChar + paramValue;

     File inputFile = new File(paramValue);
     fileTransfer.upload(inputFile.getAbsolutePath(), remoteFile);
     return remoteFile;
   }
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      // Get the Stdouts and StdErrs
      String timeStampedServiceName = GFacUtils.createUniqueNameForService(jobExecutionContext.getServiceName());
      File localStdOutFile = File.createTempFile(timeStampedServiceName, "stdout");
      File localStdErrFile = File.createTempFile(timeStampedServiceName, "stderr");

      SCPFileTransfer fileTransfer = securityContext.getSSHClient().newSCPFileTransfer();
      fileTransfer.download(app.getStandardOutput(), localStdOutFile.getAbsolutePath());
      fileTransfer.download(app.getStandardError(), localStdErrFile.getAbsolutePath());

      String stdOutStr = GFacUtils.readFileToString(localStdOutFile.getAbsolutePath());
      String stdErrStr = GFacUtils.readFileToString(localStdErrFile.getAbsolutePath());
       Map<String, ActualParameter> stringMap = new HashMap<String, ActualParameter>();
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    }

    /** @return Instantiated {@link SCPFileTransfer} implementation. */
    public SCPFileTransfer newSCPFileTransfer() {
        assert isConnected() && isAuthenticated();
        return new SCPFileTransfer(this);
    }
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    ApplicationDeploymentDescriptionType app = jobExecutionContext.getApplicationContext().getApplicationDeploymentDescription().getType();
    String remoteFile = app.getStaticWorkingDirectory() + File.separatorChar + Constants.EXECUTABLE_NAME;
    log.info(remoteFile);
    try {
      File runscript = createShellScript(jobExecutionContext);
      SCPFileTransfer fileTransfer = securityContext.getSSHClient().newSCPFileTransfer();
      fileTransfer.upload(runscript.getAbsolutePath(), remoteFile);
    } catch (IOException e) {
      throw new GFacProviderException(e.getLocalizedMessage(), e);
    }
  }
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        QName x = QName.valueOf(invocationContext.getServiceName());
        String timeStampedServiceName = GfacUtils.createServiceDirName(x);
        File localStdOutFile = new File(logDir, timeStampedServiceName + ".stdout");
        File localStdErrFile = new File(logDir, timeStampedServiceName + ".stderr");
       
        SCPFileTransfer fileTransfer = ssh.newSCPFileTransfer();
        fileTransfer.download(model.getStdOut(), localStdOutFile.getAbsolutePath());
        fileTransfer.download(model.getStderr(), localStdErrFile.getAbsolutePath());       
       
        context.getExecutionModel().setStdoutStr(GfacUtils.readFile(localStdOutFile.getAbsolutePath()));
        context.getExecutionModel().setStderrStr(GfacUtils.readFile(localStdErrFile.getAbsolutePath()));
       
        // set to context
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        QName x = QName.valueOf(invocationContext.getServiceName());
        String timeStampedServiceName = GfacUtils.createServiceDirName(x);
        File localStdOutFile = new File(logDir, timeStampedServiceName + ".stdout");
        File localStdErrFile = new File(logDir, timeStampedServiceName + ".stderr");
       
        SCPFileTransfer fileTransfer = ssh.newSCPFileTransfer();
        fileTransfer.download(model.getStdOut(), localStdOutFile.getAbsolutePath());
        fileTransfer.download(model.getStderr(), localStdErrFile.getAbsolutePath());       
       
        context.getExecutionModel().setStdoutStr(GfacUtils.readFile(localStdOutFile.getAbsolutePath()));
        context.getExecutionModel().setStderrStr(GfacUtils.readFile(localStdErrFile.getAbsolutePath()));
       
        // set to context
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            // Get the Stdouts and StdErrs
            String timeStampedServiceName = GfacUtils.createUniqueNameForService(context.getServiceName());
            File localStdOutFile = File.createTempFile(timeStampedServiceName, "stdout");
            File localStdErrFile = File.createTempFile(timeStampedServiceName, "stderr");

            SCPFileTransfer fileTransfer = ssh.newSCPFileTransfer();
            fileTransfer.download(app.getStandardOutput(), localStdOutFile.getAbsolutePath());
            fileTransfer.download(app.getStandardError(), localStdErrFile.getAbsolutePath());

            String stdOutStr = GfacUtils.readFileToString(localStdOutFile.getAbsolutePath());
            String stdErrStr = GfacUtils.readFileToString(localStdErrFile.getAbsolutePath());

            return OutputUtils.fillOutputFromStdout(context.<ActualParameter> getOutput(), stdOutStr,stdErrStr);
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  }
   private static String stageInputFiles(JobExecutionContext context,String paramValue) throws IOException,GFacException{
     ApplicationDeploymentDescriptionType app = context.getApplicationContext().getApplicationDeploymentDescription().getType();

     SSHSecurityContext securityContext = (SSHSecurityContext)context.getSecurityContext(SSHSecurityContext.SSH_SECURITY_CONTEXT);
     SCPFileTransfer fileTransfer = securityContext.getSSHClient().newSCPFileTransfer();
     String remoteFile = app.getInputDataDirectory() + File.separatorChar + paramValue;

     File inputFile = new File(paramValue);
     fileTransfer.upload(inputFile.getAbsolutePath(), remoteFile);
     return remoteFile;
   }
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    String remoteFile = app.getStaticWorkingDirectory() + File.separatorChar + Constants.EXECUTABLE_NAME;
    saveApplicationJob(jobExecutionContext, remoteFile);
    log.info(remoteFile);
    try {
      File runscript = createShellScript(jobExecutionContext);
      SCPFileTransfer fileTransfer = securityContext.getSSHClient().newSCPFileTransfer();
      GFacUtils.updateApplicationJobStatus(jobExecutionContext, jobID, ApplicationJobStatus.STAGING);
      fileTransfer.upload(runscript.getAbsolutePath(), remoteFile);
    } catch (IOException e) {
      throw new GFacProviderException(e.getLocalizedMessage(), e);
    }
  }
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  }
   private static String stageInputFiles(JobExecutionContext context,String paramValue) throws IOException,GFacException{
     ApplicationDeploymentDescriptionType app = context.getApplicationContext().getApplicationDeploymentDescription().getType();

     SSHSecurityContext securityContext = (SSHSecurityContext)context.getSecurityContext(SSHSecurityContext.SSH_SECURITY_CONTEXT);
     SCPFileTransfer fileTransfer = securityContext.getSSHClient().newSCPFileTransfer();
     String remoteFile = app.getInputDataDirectory() + File.separatorChar + paramValue;

     File inputFile = new File(paramValue);
     fileTransfer.upload(inputFile.getAbsolutePath(), remoteFile);
     return remoteFile;
   }
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Related Classes of net.schmizz.sshj.xfer.scp.SCPFileTransfer

  • bear.plugins.sh.RemoteSystemSession
  • net.schmizz.sshj.SSHClient
  • net.schmizz.sshj.xfer.FileSystemFile
  • org.apache.airavata.core.gfac.provider.impl.SSHProvider
  • org.apache.airavata.gfac.handler.SCPInputHandler
  • org.apache.airavata.gfac.handler.SCPOutputHandler
  • org.apache.airavata.gfac.provider.impl.SSHProvider
  • org.ogce.gfac.provider.EC2Provider
  • org.ogce.gfac.provider.SSHProvider
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