}
@Test(dependsOnMethods={"setup"})
public void test() {
Assert.assertEquals(alignmentArray.getAlignedTargetSpan(0, 1),new Span(0,1));
Assert.assertEquals(alignmentArray.getAlignedTargetSpan(1, 2),new Span(0,2));
Assert.assertEquals(alignmentArray.getAlignedTargetSpan(2, 3),new Span(0,3));
Assert.assertEquals(alignmentArray.getAlignedTargetSpan(3, 4),new Span(0,4));
Assert.assertEquals(alignmentArray.getAlignedSourceSpan(0, 1),new Span(0,4));
Assert.assertEquals(alignmentArray.getAlignedSourceSpan(1, 2),new Span(1,2));
Assert.assertEquals(alignmentArray.getAlignedSourceSpan(2, 3),new Span(2,3));
Assert.assertEquals(alignmentArray.getAlignedSourceSpan(3, 4),new Span(3,4));
}