List<String> kmers = AssemblerDNA.idealShotgun(sequence, k);
DeBruijnGraph graph = AssemblerDNA.getDeBruijnGraph(kmers, true);
// graph = AssemblerDNA.simplify(graph);
JApplet grApphlet = new GrApphlet();
((GrApphlet) grApphlet).setGraph(graph);
JFrame mainFrame = new JFrame("12l-mbi");
grApphlet.init();
mainFrame.add(grApphlet, BorderLayout.CENTER);
mainFrame.pack();
mainFrame.setVisible(true);
mainFrame.setDefaultCloseOperation(JFrame.EXIT_ON_CLOSE);