Examples of GlobusJobSubmission

Examples of org.apache.aiaravata.application.catalog.data.model.GlobusJobSubmission

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            em = AppCatalogJPAUtils.getEntityManager();
            em.getTransaction().begin();
            AppCatalogQueryGenerator generator = new AppCatalogQueryGenerator(GLOBUS_SUBMISSION);
            generator.setParameter(GlobusJobSubmissionConstants.SUBMISSION_ID, identifier);
            Query q = generator.selectQuery(em);
            GlobusJobSubmission globusJobSubmission = (GlobusJobSubmission) q.getSingleResult();
            GlobusJobSubmissionResource globusJobSubmissionResource =
                    (GlobusJobSubmissionResource) AppCatalogJPAUtils.getResource(
                            AppCatalogResourceType.GLOBUS_SUBMISSION, globusJobSubmission);
            em.getTransaction().commit();
            em.close();
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Examples of org.apache.aiaravata.application.catalog.data.model.GlobusJobSubmission

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                generator.setParameter(GlobusJobSubmissionConstants.RESOURCE_JOB_MANAGER, value);
                q = generator.selectQuery(em);
                results = q.getResultList();
                if (results.size() != 0) {
                    for (Object result : results) {
                        GlobusJobSubmission globusJobSubmission = (GlobusJobSubmission) result;
                        GlobusJobSubmissionResource globusJobSubmissionResource =
                                (GlobusJobSubmissionResource) AppCatalogJPAUtils.getResource(
                                        AppCatalogResourceType.GLOBUS_SUBMISSION, globusJobSubmission);
                        globusSubmissionResourceList.add(globusJobSubmissionResource);
                    }
                }
            } else if (fieldName.equals(GlobusJobSubmissionConstants.SECURITY_PROTOCAL)) {
                generator.setParameter(GlobusJobSubmissionConstants.SECURITY_PROTOCAL, value);
                q = generator.selectQuery(em);
                results = q.getResultList();
                if (results.size() != 0) {
                    for (Object result : results) {
                        GlobusJobSubmission globusJobSubmission = (GlobusJobSubmission) result;
                        GlobusJobSubmissionResource globusJobSubmissionResource =
                                (GlobusJobSubmissionResource) AppCatalogJPAUtils.getResource(
                                        AppCatalogResourceType.GLOBUS_SUBMISSION, globusJobSubmission);
                        globusSubmissionResourceList.add(globusJobSubmissionResource);
                    }
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Examples of org.apache.aiaravata.application.catalog.data.model.GlobusJobSubmission

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                generator.setParameter(GlobusJobSubmissionConstants.SUBMISSION_ID, value);
                q = generator.selectQuery(em);
                results = q.getResultList();
                if (results.size() != 0) {
                    for (Object result : results) {
                        GlobusJobSubmission globusJobSubmission = (GlobusJobSubmission) result;
                        globusSubmissionResourceIDs.add(globusJobSubmission.getSubmissionID());
                    }
                }
            } else if (fieldName.equals(GlobusJobSubmissionConstants.GLOBUS_GATEKEEPER_EP)) {
                generator.setParameter(GlobusJobSubmissionConstants.GLOBUS_GATEKEEPER_EP, value);
                q = generator.selectQuery(em);
                results = q.getResultList();
                if (results.size() != 0) {
                    for (Object result : results) {
                        GlobusJobSubmission globusJobSubmission = (GlobusJobSubmission) result;
                        globusSubmissionResourceIDs.add(globusJobSubmission.getSubmissionID());
                    }
                }
            }
            else if (fieldName.equals(GlobusJobSubmissionConstants.SECURITY_PROTOCAL)) {
                generator.setParameter(GlobusJobSubmissionConstants.SECURITY_PROTOCAL, value);
                q = generator.selectQuery(em);
                results = q.getResultList();
                if (results.size() != 0) {
                    for (Object result : results) {
                        GlobusJobSubmission globusJobSubmission = (GlobusJobSubmission) result;
                        globusSubmissionResourceIDs.add(globusJobSubmission.getSubmissionID());
                    }
                }
            } else if (fieldName.equals(GlobusJobSubmissionConstants.RESOURCE_JOB_MANAGER)) {
                generator.setParameter(GlobusJobSubmissionConstants.RESOURCE_JOB_MANAGER, value);
                q = generator.selectQuery(em);
                results = q.getResultList();
                if (results.size() != 0) {
                    for (Object result : results) {
                        GlobusJobSubmission globusJobSubmission = (GlobusJobSubmission) result;
                        globusSubmissionResourceIDs.add(globusJobSubmission.getSubmissionID());
                    }
                }
            } else {
                em.getTransaction().commit();
                em.close();
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Examples of org.apache.aiaravata.application.catalog.data.model.GlobusJobSubmission

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    public void save() throws AppCatalogException {
        EntityManager em = null;
        try {
            em = AppCatalogJPAUtils.getEntityManager();
            GlobusJobSubmission existingGlobusSubmission = em.find(GlobusJobSubmission.class, submissionID);
            em.close();

            em = AppCatalogJPAUtils.getEntityManager();
            em.getTransaction().begin();
            if (existingGlobusSubmission != null) {
                existingGlobusSubmission.setSubmissionID(submissionID);
                existingGlobusSubmission.setResourceJobManager(resourceJobManager);
                existingGlobusSubmission.setSecurityProtocol(securityProtocol);
                em.merge(existingGlobusSubmission);
            } else {
                GlobusJobSubmission globusJobSubmission = new GlobusJobSubmission();
                globusJobSubmission.setSubmissionID(submissionID);
                globusJobSubmission.setSecurityProtocol(securityProtocol);
                globusJobSubmission.setResourceJobManager(resourceJobManager);
                em.persist(globusJobSubmission);
            }
            em.getTransaction().commit();
            em.close();
        } catch (Exception e) {
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Examples of org.apache.aiaravata.application.catalog.data.model.GlobusJobSubmission

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    public boolean isExists(Object identifier) throws AppCatalogException {
        EntityManager em = null;
        try {
            em = AppCatalogJPAUtils.getEntityManager();
            GlobusJobSubmission globusJobSubmission = em.find(GlobusJobSubmission.class, identifier);
            em.close();
            return globusJobSubmission != null;
        } catch (ApplicationSettingsException e) {
            logger.error(e.getMessage(), e);
            throw new AppCatalogException(e);
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Examples of org.apache.airavata.model.appcatalog.GlobusJobSubmission

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        SSHJobSubmission sshJobSubmissionProtocol = getSSHJobSubmissionProtocol(jobSubmissionProtocolDataId);
        host.getType().changeType(SSHHostType.type);
        //TODO fill the data
        break;
      case GRAM:
        GlobusJobSubmission globusJobSubmissionProtocol = getGlobusJobSubmissionProtocol(jobSubmissionProtocolDataId);
        host.getType().changeType(GlobusHostType.type);
        //TODO fill the data
        break;
      case GSISSH:
        GSISSHJobSubmission gsisshJobSubmissionProtocol = getGSISSHJobSubmissionProtocol(jobSubmissionProtocolDataId);
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Examples of org.apache.airavata.model.appcatalog.GlobusJobSubmission

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      String globusJobSubmissionProtocolResourceId)
      throws InvalidRequestException, AiravataClientException,
      AiravataSystemException, TException {
    try {
      HostDescription hostDescriptor = getRegistry().getHostDescriptor(globusJobSubmissionProtocolResourceId);
      GlobusJobSubmission d = new GlobusJobSubmission();
      d.setSecurityProtocol(SecurityProtocol.GSI);
      d.setResourceJobManager(ResourceJobManager.PBS);
      d.setJobSubmissionDataID(globusJobSubmissionProtocolResourceId);
      if (hostDescriptor.getType() instanceof GlobusHostType){
        GlobusHostType globusHostType = (GlobusHostType)hostDescriptor.getType();
        d.setGlobusGateKeeperEndPoint(Arrays.asList(globusHostType.getGlobusGateKeeperEndPointArray()));
      } else {
        throw new Exception("Saved job protocol is not Globus");
      }
      return d;
    } catch (Exception e) {
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