Examples of GenomeLocParser

Examples of org.broadinstitute.gatk.utils.GenomeLocParser

84
85
86
87
88
89
90
91
92
93
94
            createTestBAM();

            SAMDataSource dataSource = new SAMDataSource(Arrays.asList(testBAM),
                                                         new ThreadAllocation(),
                                                         null,
                                                         new GenomeLocParser(header.getSequenceDictionary()),
                                                         false,
                                                         ValidationStringency.SILENT,
                                                         ReadShard.DEFAULT_MAX_READS,  // reset ReadShard.MAX_READS to ReadShard.DEFAULT_MAX_READS for each test
                                                         downsamplingMethod,
                                                         new ValidationExclusion(),
View Full Code Here
TOP
Copyright © 2018 www.massapi.com. All rights reserved.
All source code are property of their respective owners. Java is a trademark of Sun Microsystems, Inc and owned by ORACLE Inc. Contact coftware#gmail.com.