Package fork.lib.bio.anno.genomic

Examples of fork.lib.bio.anno.genomic.LandscapeBuffer

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    File datf= new File(dir+"/data/chip-seq/norm/norm_"+samp+".wig");
   

    LandscapeBuffer lb= new BedGraphBuffer(datf);
    GenomicRegionsBuilder gb= new BedReader(regf).getGenomicRegionsBuilder();

   
   
    ScanIntra si = new ScanIntra(gb, lb);
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Related Classes of fork.lib.bio.anno.genomic.LandscapeBuffer

  • data.cerevisiae.inhouse.a_norm.NormChipChipSignal
  • data.cerevisiae.inhouse.a_norm.NormChipSeqRPM
  • data.cerevisiae.lee2007.NormToLee
  • data.cerevisiae.nihroadmap.Score
  • data.cerevisiae.region.scan.AntisenseFraction
  • data.cerevisiae.region.scan.LinkAntisense
  • data.cerevisiae.region.scan.ScanIntra
  • data.cerevisiae.test.ratio.ToRatio
  • data.human.inhouse.norm.NormChipSeq
  • data.human.statham2014mods.NormTest
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