new Double(r.scores[0]), new Double(r.scores[1])
};
gbout.add(ge);
}
gbout.sortAll();
BedExporter be= new BedExporter(gbout){
protected String column3(GenomicRegion gr){
return ((Object[])gr.attr)[0].toString();
}
protected String column4(GenomicRegion gr){
return gr.toUCSCFormat();
}
protected String column6On(GenomicRegion gr){
Object[] os= (Object[])gr.attr;
return (Double)os[1]+"\t"+ (Double)os[2];
}
};
be.param().ifExpanded= true;
be.writeToFile(out);
}