Package edu.isi.karma.rep.alignment

Examples of edu.isi.karma.rep.alignment.ColumnNode

731
732
733
734
735
736
737
738
739
740
741
        tree.addVertex(iNode);
      }
     
      if (n instanceof ColumnNode) {
        if (model.getMappingToSourceColumns() != null) {
          ColumnNode cn = model.getMappingToSourceColumns().get(n);
          modelToAlignmentNode.put(n, cn);
          tree.addVertex(cn);
        }
      }
    }
View Full Code Here
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
      if (n == null) {
        n = new org.kohsuke.graphviz.Node();
//        label = (uri == null || uri.trim().length() == 0?id:uri));
        targetLabel = (targetLocalName == null || targetLocalName.trim().length() == 0?targetId:targetLocalName);
        if (target instanceof ColumnNode) {
          ColumnNode mappedColumn = (mappingToSourceColumns == null) ? (ColumnNode)target : mappingToSourceColumns.get(target);
          targetLabel = mappedColumn.getColumnName();
        }
        if (showNodeMetaData) {
//          targetLabel += metaDataSeparator + getModelIds(target.getModelIds());
          if (target instanceof ColumnNode) {
            ColumnNode mappedColumn = (mappingToSourceColumns == null) ? (ColumnNode)target : mappingToSourceColumns.get(target);
            List<SemanticType> suggestedTypes = mappedColumn.getTopKSuggestions(4);
            if (suggestedTypes != null)
              for (SemanticType st : suggestedTypes)
                targetLabel += "\n[" +
                    getLocalName(st.getDomain().getUri()) +
                    "," +
View Full Code Here
289
290
291
292
293
294
295
296
297
298
299
300
        for (LabeledLink link:outgoingLinks) {
         
          if (link instanceof ClassInstanceLink || link instanceof ColumnSubClassLink) {
            Node tNode = link.getTarget();
            if (tNode instanceof ColumnNode) {
              ColumnNode cnode = (ColumnNode) tNode;
              String hNodeId = cnode.getHNodeId();
              String columnName = translator.getColumnNameForHNodeId(hNodeId);
              ColumnTemplateTerm cnTerm = new ColumnTemplateTerm(columnName);
             
              // Identify classInstance links to set the template
              if (link instanceof ClassInstanceLink) {
View Full Code Here
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
          }
         
          // Create a data property map
          else if(target instanceof ColumnNode) {
            // Create the object map
            ColumnNode cnode = (ColumnNode) target;
            String hNodeId = cnode.getHNodeId();
            String columnName = translator.getColumnNameForHNodeId(hNodeId);
            ColumnTemplateTerm cnTerm = new ColumnTemplateTerm(columnName);
            TemplateTermSet termSet = expandColumnTemplateTermForPyTransforms(
                hNodeId, cnTerm);
           
            String rdfLiteralUri =   cnode.getRdfLiteralType() == null? "" : cnode.getRdfLiteralType().getUri();
            StringTemplateTerm rdfLiteralTypeTerm = new StringTemplateTerm(rdfLiteralUri, true);
            TemplateTermSet rdfLiteralTypeTermSet = new TemplateTermSet();
            rdfLiteralTypeTermSet.addTemplateTermToSet(rdfLiteralTypeTerm);

            ObjectMap objMap = new ObjectMap(hNodeId, termSet, rdfLiteralTypeTermSet);
View Full Code Here
642
643
644
645
646
647
648
649
650
651
652
653
      // Check for the data property specialization
      else if (olink instanceof DataPropertyOfColumnLink) {
        DataPropertyOfColumnLink dlink = (DataPropertyOfColumnLink) olink;
        Node target = link.getTarget();
        if (target instanceof ColumnNode) {
          ColumnNode cnode = (ColumnNode) target;
          if (dlink.getSpecializedColumnHNodeId().equals(cnode.getId()))
            return dlink;
        }
      }
    }
    return null;
View Full Code Here
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
    // Create column nodes for all columns
    List<HNode> sortedLeafHNodes = new ArrayList<HNode>();
    worksheet.getHeaders().getSortedLeafHNodes(sortedLeafHNodes);
    for (HNode hNode : sortedLeafHNodes){
      String columnName = hNode.getColumnName().trim().replaceAll(" ", "_");
      ColumnNode columnNode = alignment.getColumnNodeByHNodeId(hNode.getId());
     
      List<LabeledLink> columnNodeIncomingLinks = alignment.getIncomingLinks(columnNode.getId());
      if (columnNodeIncomingLinks == null || columnNodeIncomingLinks.isEmpty()) { // SemanticType not yet assigned
        Label propertyLabel = new Label(ns + columnName, ns, "karma");
        alignment.addDataPropertyLink(classNode, columnNode, propertyLabel);
       
        // Create a semantic type object
        SemanticType type = new SemanticType(hNode.getId(), propertyLabel, internalNodeLabel, SemanticType.Origin.User, 1.0);
        worksheet.getSemanticTypes().addType(type);
        columnNode.setUserSelectedSemanticType(type);
      } else {
        // User-defined: do nothing
      }
    }
    if(!this.isExecutedInBatch())
View Full Code Here
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
        if (type != null && type.getConfidenceLevel() != SemanticType.ConfidenceLevel.Low) {
          writer.key(JsonKeys.HNodeId.name())
              .value(type.getHNodeId())
              .key(JsonKeys.SemanticTypesArray.name()).array();
         
          ColumnNode alignmentColumnNode = hNodeIdTocolumnNodeMap.get(type.getHNodeId());
          InternalNode domainNode = hNodeIdToDomainNodeMap.get(type.getHNodeId());
         
          if (alignmentColumnNode == null || domainNode == null) {
            logger.error("Column node or domain node not found in alignment." +
                " (This should not happen conceptually!):" + type);
            continue;
          }
         
          // Add the primary semantic type
          writer.object()
              .key(JsonKeys.Origin.name())
              .value(type.getOrigin().name())
              .key(JsonKeys.ConfidenceLevel.name())
              .value(type.getConfidenceLevel().name())
              .key(JsonKeys.isPrimary.name())
              .value(true);
         
          // Add the RDF literal type to show in the text box
          String rdfLiteralType = alignmentColumnNode.getRdfLiteralType() == null? "" :
            alignmentColumnNode.getRdfLiteralType().getDisplayName();
          writer.key(JsonKeys.rdfLiteralType.name())
            .value(rdfLiteralType);
         
//          String domainDisplayLabel = (domainNode.getLabel().getPrefix() != null && (!domainNode.getLabel().getPrefix().equals(""))) ?
//              (domainNode.getLabel().getPrefix() + ":" + domainNode.getLocalId()) : domainNode.getLocalId();
View Full Code Here
241
242
243
244
245
246
247
248
249
250
    Set<Node> alignmentColumnNodes = alignment.getNodesByType(NodeType.ColumnNode);
    Map<String, ColumnNode> hNodeIdToColumnNodeMap = new HashMap<String, ColumnNode>();
    if (alignmentColumnNodes == null)
      return hNodeIdToColumnNodeMap;
    for (Node cNode : alignmentColumnNodes) {
      ColumnNode columnNode = (ColumnNode) cNode;
      hNodeIdToColumnNodeMap.put(columnNode.getHNodeId(), columnNode);
    }
    return hNodeIdToColumnNodeMap;
  }
View Full Code Here
209
210
211
212
213
214
215
216
217
218
219
        });
      
       if(columnNodes != null) {
         for(Node node : columnNodes) {
           if(node instanceof ColumnNode) {
             ColumnNode columnNode = (ColumnNode)node;
             String columnName = getClassName(columnNode);
             List<LabeledLink> links = alignment.getIncomingLinks(node.getId());
             for(LabeledLink link : links) {
               String property = getPropertyName(link.getLabel());
               String classname = getClassName(link.getSource());
View Full Code Here
TOP

Related Classes of edu.isi.karma.rep.alignment.ColumnNode

  • edu.isi.karma.controller.command.alignment.ChangeInternalNodeLinksCommand
  • edu.isi.karma.controller.command.alignment.SetMetaPropertyCommand
  • edu.isi.karma.controller.command.alignment.SetSemanticTypeCommand
  • edu.isi.karma.controller.command.alignment.SuggestAutoModelCommand
  • edu.isi.karma.controller.command.alignment.SuggestModelCommand
  • edu.isi.karma.controller.command.alignment.UnassignSemanticTypeCommand
  • edu.isi.karma.controller.command.publish.PublishReportCommand
  • edu.isi.karma.controller.update.AlignmentSVGVisualizationUpdate
  • edu.isi.karma.controller.update.SemanticTypesUpdate
  • edu.isi.karma.kr2rml.mapping.KR2RMLMappingGenerator
    • Copyright © 2018 www.massapicom. All rights reserved.
    All source code are property of their respective owners. Java is a trademark of Sun Microsystems, Inc and owned by ORACLE Inc. Contact coftware#gmail.com.