Examples of EDBUnit

edu.gmu.seor.prognos.unbbayesplugin.cps.datastructure.EDBUnit
The Class EDBUnit.

Examples of edu.gmu.seor.prognos.unbbayesplugin.cps.datastructure.EDBUnit

  // coord[2] => second parent node's state index
  // ...
  // and then we can use PotentialTable.setValue(coord, 0.5); 
  public void AddNewStatesValueToBNNode(EDBUnit lastCPT, int coord[], ArrayMap<Object, Integer> stateIndexMap, PotentialTable auxTab){  
    //finding last row of CPT            EX) ROOT.NODES.Child.CPT.5.[DATA]:Number.high.[DATA]:Height.
    EDBUnit lastCPTISA = lastCPT.getRel("ISA");
     if(lastCPTISA != null && lastCPTISA.map.size() != 0 ){
      for( String str : lastCPTISA.map.keySet() ){
        EDBUnit t = lastCPTISA.map.get(str);  
        
        int variableIndex = auxTab.indexOfVariable( t.getData() );
        Node n = (Node)auxTab.getVariableAt(variableIndex);
        coord[variableIndex] = getStateIndexFromBN( n, t.getName() );
        
        AddNewStatesValueToBNNode( t, coord, stateIndexMap, auxTab);
      }
    }
    else{

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Examples of edu.gmu.seor.prognos.unbbayesplugin.cps.datastructure.EDBUnit

        
    AddNewStateValueToSNode( state.getNext(), coord, stateIndexMap, auxTab);
  } 
  
  public void createUDBfromSDB(ProbabilisticNetwork rede, EDBUnit sNode){ 
    EDBUnit states = sNode.get("STATES");
    EDBUnit cpt = sNode.get("CPT");
    EDBUnit eq = sNode.get("INFO.EQUATION");
    String type = sNode.get("INFO.TYPE").getData();
    Node uNode = null;
        
    if( type.equalsIgnoreCase("Discrete") ){ 
      //create new Probabilistic uNode 
      uNode = new ProbabilisticNode();
      uNode.setName(sNode.getName());
      uNode.setDescription(sNode.getName());
      //reset all states
      ((ProbabilisticNode )uNode).removeAllStates();
       //set states
      ArrayMap<Object, Integer> stateIndexMap = new ArrayMap<Object, Integer>();
      int c = 0;
      EDBUnit stateFirst = states.getNext();
      uNode.appendState(stateFirst.getName());
      stateIndexMap.put( stateFirst.getName(),  c++);
      AddNewStatesToBNNode( uNode, stateIndexMap, c, stateFirst.getNext() );
       
    }else
    if( type.equalsIgnoreCase("Continuous") ){ 
      //create new Continuous uNode 
      uNode = new ContinuousNode();

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Examples of edu.gmu.seor.prognos.unbbayesplugin.cps.datastructure.EDBUnit

    Double dParameter1 = Double.NaN;
    Double dParameter2 = Double.NaN;
       
    //iteration  
    int i = 0;
    EDBUnit ISA = eq.getRel("ISA");
    if( ISA != null )
    for( String str : ISA.getMap().keySet() ){ 
      EDBUnit child = ISA.map.get(str); 
      
      if( i == 0 )
        dParameter1 = getMeanAndSTD( i, child, normalDistribution, functionIndex );  
      else
        dParameter2 = getMeanAndSTD( i, child, normalDistribution, functionIndex );

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Examples of edu.gmu.seor.prognos.unbbayesplugin.cps.datastructure.EDBUnit

        
    return ret;
  }
  
  public void setStatesOfUDB(ProbabilisticNetwork rede, EDBUnit sNode){ 
    EDBUnit states = sNode.get("STATES");
    EDBUnit cpt = sNode.get("CPT");
    EDBUnit eq = sNode.get("EQUATION");
    String type = sNode.get("INFO.TYPE").getData();
    Node uNode = rede.getNode(sNode.getName());
        
    if( type.equalsIgnoreCase("Discrete") ){ 
      ArrayMap<Object, Integer> stateIndexMap = new ArrayMap<Object, Integer>();

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Examples of edu.gmu.seor.prognos.unbbayesplugin.cps.datastructure.EDBUnit

      createUDBfromSDB( rede, node );
    } 
    */
  
    //step 1. create new uNodes from sNodes
    EDBUnit nodes = EDB.This().get("ROOT.ENGINES.JT.NODES");  
    EDBUnit ISA = nodes.getRel("ISA"); 
    for( String str : ISA.getMap().keySet() ){ 
      EDBUnit node = ISA.map.get(str);
      createUDBfromSDB( rede, node );
    } 
      
    //step 2. create new edges between sNodes  
    for( String str : ISA.getMap().keySet() ){ 
      EDBUnit node = ISA.map.get(str); 
      EDBUnit parents = node.get("PARENTS"); 
      createEdgeOfUDB( rede, node, parents.getNext() ); 
    } 
    
    //step 3. set states  
    for( String str : ISA.getMap().keySet() ){ 
      EDBUnit node = ISA.map.get(str);
      EDBUnit type = node.get("INFO.TYPE"); 
      EDBUnit description = node.get("INFO.DESCRIPTION");
      EDBUnit evidence = node.get("EVIDENCE");
      EDBUnit parents = node.get("PARENTS");
      EDBUnit children = node.get("CHILDREN");
      EDBUnit cpt = node.getCopied("CPT"); 
      EDBUnit eq = node.getCopied("EQUATION"); 
      EDBUnit bel = node.get("BEL"); 
      setStatesOfUDB( rede, node ); 
    } 
    
    //step 4. set evidences
     for( String str : ISA.getMap().keySet() ){ 
      EDBUnit node = ISA.map.get(str); 
      EDBUnit evidence = node.get("EVIDENCE"); 
      EDBUnit type = node.get("INFO.TYPE"); 
      Node uNode = rede.getNode(str);
            
      if( evidence != null ){
        if( type.getData().equalsIgnoreCase("Discrete") ){ 
          rede.setDescreteEvidence((ProbabilisticNode)uNode, uNode.getState(evidence.getData()));
          
        }else
        if( type.getData().equalsIgnoreCase("Continuous") ){
          rede.setContinuousEvidence((ContinuousNode)uNode, evidence.getDataByDouble()); 
        } 
      }  
     }

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Examples of edu.gmu.seor.prognos.unbbayesplugin.cps.datastructure.EDBUnit

   *
   * @param SNodes the s nodes
   * @param UNode the u node
   */
  public void createSNode( EDBUnit SNodes, Node UNode  ){ 
    EDBUnit node   = SNodes.create(UNode.getName());
    EDBUnit info   = node.create("INFO"); 
    node.create("STATES_MEAN");
    node.create("STATES");
    node.create("PARENTS");
    node.create("CHILDREN");
    node.create("CPT");
    node.create("EQUATION");
    node.create("OLD_BEL"); 
    node.create("BEL");   
    EDBUnit script = node.create("SCRIPT");   
    EDBUnit kind   = info.create("KIND");
    EDBUnit desc   = info.create("DESCRIPTION");
    EDBUnit type   = info.create("TYPE");  
    EDBUnit flag   = info.create("SEARCH_FLAG"); 
    EDBUnit X = info.create("X"); 
    EDBUnit Y = info.create("Y"); 
        
    String strScript = CPS.getInstance().getScript(UNode);
    if( strScript != null && strScript.length() > 0 )
      script.setData(strScript);
    else
      script.setData("");
  
    Point2D position = UNode.getPosition();
    Double dx = new Double(position.getX());
    Double dy = new Double(position.getY());
    X.setData(dx.toString());
    Y.setData(dy.toString());
          
    if( UNode instanceof GmmNodePluginStub ){
      type.setData("Continuous");
    }else 
    if( UNode instanceof ProbabilisticNode ){

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Examples of edu.gmu.seor.prognos.unbbayesplugin.cps.datastructure.EDBUnit

   * @param SNode the s node
   * @param parentName the parent name
   * @return the eDB unit
   */
  public EDBUnit createPARENT(EDBUnit SNodes, EDBUnit SNode, String parentName){
    EDBUnit parents   = SNode.get("PARENTS");
    EDBUnit newParent = parents.getNext(parentName); 
    EDBUnit parent    = SNodes.get(parentName);
        
    if( newParent != null )
      return newParent;
    
    newParent = parents.createNext(parentName); 
            
    if( parent != null ){
      EDBUnit children = parent.get("CHILDREN");
      children.createNext(SNode.getName()); 
  
      //parent.print("");
    }
    
    return newParent;

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Examples of edu.gmu.seor.prognos.unbbayesplugin.cps.datastructure.EDBUnit

   *
   * @param SNodes the s nodes
   * @param UNode the u node
   */
  public void addParents(EDBUnit SNodes, Node UNode){
    EDBUnit SNode = SNodes.get( UNode.getName() );
    for( Node parent : UNode.getParents() ){
      createPARENT(SNodes, SNode, parent.getName());
    }    
  }

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Examples of edu.gmu.seor.prognos.unbbayesplugin.cps.datastructure.EDBUnit

   * @param s the s
   * @param v the v
   * @return the eDB unit
   */
  public EDBUnit createSTATE(EDBUnit p, String s, String v){ 
    EDBUnit states   = p.get("STATES"); 
    EDBUnit st      = states.createNext(s);
    st.setData(v); 
    
    //for the continuous states, we need to have mean number of the bin
    EDBUnit type   = p.get("INFO.TYPE");
    if( type.getData().equalsIgnoreCase("Continuous") ){
      EDBUnit statesMean   = p.get("STATES_MEAN");
      EDBUnit stMeanLast   = statesMean.getLastNext();
      EDBUnit stMean      = statesMean.createNext(s);
      stMean.setData(v);
      
      if( stMeanLast.getName().equalsIgnoreCase("NINF") ){
      //  dExtreamNINF = Double.valueOf(stMean.getName());
      }
      
      if( stMean.getName().equalsIgnoreCase("PINF") ){
      //  dExtreamPINF = Double.valueOf(stMeanLast.getName());
      }      
    }
    
    return st;

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Examples of edu.gmu.seor.prognos.unbbayesplugin.cps.datastructure.EDBUnit

   *
   * @param SNodes the s nodes
   * @param UNode the u node
   */
  public void createStates(EDBUnit SNodes, Node UNode){
    EDBUnit SNode = SNodes.get( UNode.getName() ); 
    
     if( UNode instanceof ProbabilisticNode){
       ProbabilisticNode aux = (ProbabilisticNode) UNode;
      PotentialTable auxTab = aux.getProbabilityFunction();

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