Package cysbml.mapping

Examples of cysbml.mapping.NamedSBaseToNodeMapping


  }
 
  //////////// HANDLE THE SBML DOCUMENTS ///////////////////////////////////////////////////////
 
  public void putSBMLDocument(String networkName, SBMLDocument document, CyNetwork network){
    NamedSBaseToNodeMapping mapping = new NamedSBaseToNodeMapping(network);
    putSBMLDocument(networkName, document, mapping);
  }
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  public void putSBMLDocument(String networkName, SBMLDocument document, CyNetwork network){
    NamedSBaseToNodeMapping mapping = new NamedSBaseToNodeMapping(network);
    putSBMLDocument(networkName, document, mapping);
  }
  public void putSBMLDocumentForLayout(String networkName, SBMLDocument document, CyNetwork network, Layout layout){
    NamedSBaseToNodeMapping mapping = new NamedSBaseToNodeMapping(layout);
    putSBMLDocument(networkName, document, mapping);
  }
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  public void putSBMLDocumentForLayout(String networkName, SBMLDocument document, CyNetwork network, Layout layout){
    NamedSBaseToNodeMapping mapping = new NamedSBaseToNodeMapping(layout);
    putSBMLDocument(networkName, document, mapping);
  }
  public void putSBMLDocumentForGRN(String networkName, SBMLDocument document, CyNetwork network){
    NamedSBaseToNodeMapping mapping = new NamedSBaseToNodeMapping(network);
    putSBMLDocument(networkName, document, mapping);
  }
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