Package com.mobixess.jodb.core

Examples of com.mobixess.jodb.core.JodbIOException


        int typeID = dataContainer.getOriginalClassType();
        try {
            classDescriptor = _session.getDescriptorForClass(typeID);
        } catch (Exception e) {
            e.printStackTrace();
            throw new JodbIOException(e);
        }
        _constraints.evaluatePersistentCopy(classDescriptor, dataContainer, null, context);
        HashMap<String, Field> unProcessedDescendantFields = _threadLocalAuxData.get()._processedFieldsBuffer;
        unProcessedDescendantFields.clear();
        FieldAndIDRecord[] fields = classDescriptor.getAllFields();
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        byte[] result;
        try {
            result = name.getBytes("UTF8");
        } catch (UnsupportedEncodingException e) {
            e.printStackTrace();
            throw new JodbIOException(e);
        }
        return result;
    }
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        byte[] result;
        try {
            result = objectToTranslate.getBytes("UTF8");
        } catch (UnsupportedEncodingException e) {
            e.printStackTrace();
            throw new JodbIOException(e);
        }
        return result;
    }
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                Class type = field.getType();
                if (type == String.class || type == Enum.class || type.isPrimitive() || PrimitiveJavaTypesUtil.isPrimitiveWrapper(type)) {
                    try {
                        activeObject = field.get(activeObject);
                    } catch (Exception e) {
                        throw new JodbIOException(e);
                    }
                }else{
                    activeObject = null;
                }
            }
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                Class persistentObjectClass;
                try {
                    persistentObjectClass = context.getSession().resolveClassForID(dataContainer.getOriginalClassType());
                } catch (ClassNotFoundException e) {
                    //TODO debug output???
                    throw new JodbIOException(e);
                }
               
                if(persistentObjectClass==String.class || Enum.class.isAssignableFrom(persistentObjectClass)){
                    SortDataCache sortDataCache = context.getSortDataCache();
                    if(sortDataCache!=null){
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                Object value;
                try {
                    value = field.get(currentObject);
                } catch (Exception e) {
                    e.printStackTrace();
                    throw new JodbIOException(e);
                }
                if(value!=null){
                    return false;
                }
            }
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                    processedFields[index] = true;
                    continue;
                }
            } catch (Exception e) {
                e.printStackTrace();
                throw new JodbIOException(e);
            }
        }
        return true;
    }
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            Object value;
            try {
                value = next.get(object);
            } catch (Exception e) {
                e.printStackTrace();
                throw new JodbIOException(e);
            }
            TransactionHandle childObjectHandle = transactionObjects.get(value);
            if(value == null || childObjectHandle == null || childObjectHandle.is_DELETE_Transaction()){
                //null fieds may not require
                //nullFields.add(next);
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                        }
                        assembleTransactionDataForObject(context, childObj, tContainer);
                    }
                } catch (Exception e) {
                    e.printStackTrace();
                    throw new JodbIOException(e);
                }
            }           
            return offset;
        }
       
        IRandomAccessDataBuffer transactionFile = tContainer.getTransactionNewDataFile();
        transactionFile.resetToEnd();
       
        Vector<ObjectFieldRecord> fieldsWithAbsoluteAddr = new Vector<ObjectFieldRecord>();
        Vector<ObjectFieldRecord> fieldsWithRelativeAddr = new Vector<ObjectFieldRecord>();
        Vector<Field> primitiveFields = new Vector<Field>();
       
        if(!classDescr.isArray()){
            classifyFields(objectToPersist, classDescr, transactionObjects, fieldsWithAbsoluteAddr, fieldsWithRelativeAddr, primitiveFields);
        }
       
       
        long objectIDOffset = transactionFile.getCursorOffset();
       
        tHandle.setTransactionOffset(objectIDOffset);

        if(JODBConfig.DEBUG){
            _logger.info(" >>> Transaction: Object "+rootObject.getClass()+" "+rootObject+" start offset ="+objectIDOffset);
        }
       
        boolean translated = rootObject!=objectToPersist;
        byte arrayElementSize = 0;
        long lengthEstimate;
        if(!classDescr.isArray()){
            lengthEstimate = estimateObjectLength(tHandle, fieldsWithAbsoluteAddr.size(), fieldsWithRelativeAddr.size(), classDescr, translated);
        }else{
            ByteHolder byteHolder = new ByteHolder();
            lengthEstimate = estimateArrayObjectLength(context, tHandle, objectToPersist, classDescr, byteHolder, translated);
            arrayElementSize = byteHolder._value;
        }
       
        int objId = composeEntryID( JODBIOBase.ENTRY_OBJECT_ID, lengthEstimate);
        int objIdWithRedirectionBit = tHandle.isNewObject()? objId : JODBIOBase.addRedirectedObjectModifier(objId);
        transactionFile.writeShort(objIdWithRedirectionBit);
        writeEntryLenForID(objId,0,transactionFile);//reserve space for length
       
        long objectBodyOffset = transactionFile.getCursorOffset();
       
//        if(JODBConfig.DEBUG){
//            _logger.info("Transaction: Object "+rootObject.getClass()+" "+rootObject+" header len ="+headerLen);
//        }
       
        int primaryMask = formPrimaryObjectMask(0, fieldsWithAbsoluteAddr.size()>0, fieldsWithRelativeAddr.size()>0, primitiveFields.size()>0, translated, tHandle, classDescr);;
       
        transactionFile.writeByte(primaryMask);
       
        int secondaryMask = formSecondaryObjectMask(0, tHandle);
       
        transactionFile.writeByte(secondaryMask);
       
        short newCyclicCounter =  (short) (tHandle.getCyclicalVersionCounter()+1);
       
        if(newCyclicCounter == 256){
            newCyclicCounter = 0;
        }
        tHandle.setCyclicalVersionCounter(newCyclicCounter);
       
        transactionFile.writeByte(newCyclicCounter);
       
        tHandle.setTranslatedObjectDataMask((byte) primaryMask);
       
        //
        if(tHandle.generateUID()){
            Random random = new Random();
            transactionFile.writeLong(random.nextLong());
        }
        long time = System.currentTimeMillis();
        if(tHandle.generateCreationTS()){
            transactionFile.writeLong(time);
        }
        if(tHandle.generateModificationTS()){
            transactionFile.writeLong(time);
        }
       
        //
        transactionFile.writeShort(rootObjectClassID);
       
        if(translated){
            int translatedObjectClassID = base.getOrSetClassTypeSubstitutionID(classDescr.getTypes()[0]);// base.getOrSetClassTypeSubstitutionID( objectToPersist.getClass().getName());
            transactionFile.writeShort(translatedObjectClassID);
        }
       
//        transactionFile.writeShort(classTypes.length);
//       
//        for (int i = 0; i < classTypes.length; i++) {
//            int id = base.getOrSetClassTypeSubstitutionID(classTypes[i]);
//            transactionFile.writeShort(id);
//        }

        if(fieldsWithAbsoluteAddr.size()>0){//with absolute offsets
            transactionFile.writeShort(fieldsWithAbsoluteAddr.size());
            for (int i = 0; i < fieldsWithAbsoluteAddr.size(); i++) {//writing links of unchanged objects
                ObjectFieldRecord next = fieldsWithAbsoluteAddr.elementAt(i);
                int id = base.getOrSetFieldSubstitutionID(next._field);
                transactionFile.writeShort(id);
                TransactionHandle valueHandle = transactionObjects.get(next._value);
                transactionFile.writeLong(valueHandle.getHandle().getObjectEntryOffset());
            }
        }
       
        long objectsWithRelativeAddrStartOffsetShift = -1;
        if(fieldsWithRelativeAddr.size()>0){//with relative offsets
            transactionFile.writeShort(fieldsWithRelativeAddr.size());
            objectsWithRelativeAddrStartOffsetShift = transactionFile.getCursorOffset() - objectIDOffset;
            transactionFile.setLength(transactionFile.length()+ fieldsWithRelativeAddr.size()*(2+4));
            transactionFile.seek(transactionFile.length());
        }
       
        if(primitiveFields.size()>0){
            transactionFile.writeShort(primitiveFields.size());
        }
        for (int i = 0; i < primitiveFields.size(); i++) {
            Field next = primitiveFields.elementAt(i);
            int id = base.getOrSetFieldSubstitutionID(next);
            transactionFile.writeShort(id);
            IndexingRecord record = IndexingRecord.findIndexingRecord(id, indexes);
            if(record!=null){
                //ByteBuffer currentlyPersistedValue = record.getPersistedDataBuffer();
                ByteBuffer pendingValue = record.getPendingDataBuffer();
                pendingValue.clear();
                PrimitiveJavaTypesUtil.primitiveToByteBuffer(objectToPersist, next, pendingValue);
                pendingValue.flip();
                transactionFile.getChannel().write(pendingValue);
                pendingValue.rewind();
            }else {
                try {
                    Utils.writePrimitive(objectToPersist, next,transactionFile);
                } catch (Exception e) {
                    throw new JodbIOException(e);
                }
            }           
        }
       
        long arrayDataShift = 0;
        if(classDescr.isArray()){
            int arrayLength = Array.getLength(objectToPersist);
            transactionFile.writeInt(arrayLength);
            transactionFile.writeByte(arrayElementSize);//write length of each element in array
            arrayDataShift = transactionFile.getCursorOffset() - objectIDOffset;
            boolean primitive = classDescr.isPrimitiveArray();
            if(primitive){//completely write primitive array
                try {
                    Utils.writePrimitiveArray(objectToPersist, classDescr.getArrayType(), 0, arrayLength, transactionFile);
                } catch (Exception e) {
                    _logger.log(Level.SEVERE,"",e);
                    throw new JodbIOException(e);
                }
            }else{//reserve space for references
                long spaceToReserve = arrayElementSize*arrayLength;
                long slotMasksTotal = arrayLength/8;
                if( slotMasksTotal*8 != arrayLength){
                    slotMasksTotal++;//trailing mask entry for slot <8
                }
                spaceToReserve+=slotMasksTotal;
                if(transactionFile.getCursorOffset() + spaceToReserve > transactionFile.length()  ){
                    transactionFile.setLength(transactionFile.getCursorOffset() + spaceToReserve );
                }
                transactionFile.skip(spaceToReserve);
               
            }
        }
       
        if(JODBConfig.DEBUG){
            _logger.info(" <<< Transaction: Object "+rootObject.getClass()+" "+rootObject+" end offset ="+transactionFile.getCursorOffset());
        }
       
        long objectEndOffset = transactionFile.getCursorOffset();
        long objectBodyLength = objectEndOffset - objectBodyOffset;
        if(lengthEstimate < objectBodyLength){
            throw new JodbIOException("Object length estimate error");
        }
        //long targetObjectBodyLength = objectBodyLength;
       
        if(!tHandle.isNewObject()){
            DataContainersCache dataContainersCache = TransactionUtils.getObjectDataContainerCache();
            ObjectDataContainer existingObjectHeaderData =  dataContainersCache.pullObjectDataContainer();// tContainer.getTempObjectDataContainer();

            //ioTicket.getRandomAccessBuffer().seek(tHandle.getHandle().getObjectEntryOffset());
            //JODBIOUtils.readObjectHeader(ioTicket, existingObjectHeaderData, false);
            existingObjectHeaderData.readHeader(ioTicket.getRandomAccessBuffer(),tHandle.getHandle().getObjectEntryOffset(), false);
            tHandle.setTransactionOffset(existingObjectHeaderData.getOffset());//JODBIOUtils.addAbsoluteOffsetIdentifierBit(existingObjectHeaderData.getOffset()));//if object already existed than alvays point to initial object position
            long redirectorOffset = existingObjectHeaderData.isRedirection()?existingObjectHeaderData.getOffset():-1;
            if(objectBodyLength > existingObjectHeaderData.getBodyLength() || fieldsWithRelativeAddr.size() > 0 ){
                if( existingObjectHeaderData.isRedirection() ){
                    //redirection entry space is too small, let see what is under redirection offset
                    //ioTicket.getRandomAccessBuffer().seek(existingObjectHeaderData.getRedirectionOffset());
                    long existingObjectRedirectionOffset = existingObjectHeaderData.getRedirectionOffset();
                    existingObjectHeaderData.reset();
                    existingObjectHeaderData.readHeader(ioTicket.getRandomAccessBuffer(), existingObjectRedirectionOffset, true);
                    //JODBIOUtils.readObjectHeader(ioTicket, existingObjectHeaderData, true);
                }
            }

            if(objectBodyLength <= existingObjectHeaderData.getBodyLength() && fieldsWithRelativeAddr.size() == 0){
                boolean isRedirection = existingObjectHeaderData.isRedirection();
                long redirectionOffset = existingObjectHeaderData.getRedirectionOffset();
                //long targetObjectBodyLength = existingObjectHeaderData.getBodyLength();//length for new object's header
               
                //object id(length bits) may change as we fit to maybe bigger space
                objId = JODBIOBase.ENTRY_OBJECT_ID | existingObjectHeaderData.getLengthModifierFromID();// composeEntryID( JODBIOBase.ENTRY_OBJECT_ID, targetObjectBodyLength);
               
                if(existingObjectHeaderData.isRedirectedObject()){
                    objIdWithRedirectionBit = JODBIOBase.addRedirectedObjectModifier(objId);//this is redirected entry
                }else{
                    objIdWithRedirectionBit = objId;
                }
               
                if( isRedirection ){//if we fit into redirection record than delete record under redirection offset
                    deleteObject(ioTicket, session, redirectionOffset, tContainer);//delete/backup record under redirection offset
                }
               
               
                //object can fit to old spot, write it to replacements file insteard of transaction file
                IRandomAccessDataBuffer replacementsFile = tContainer.getTransactionReplacementsDataFile();
                replacementsFile.resetToEnd();
                replacementsFile.writeByte(TRANSACTION_REPLACEMENT_ENTRY_TYPE_STATIC);
                replacementsFile.writeLong(existingObjectHeaderData.getOffset());
                long replacementLengthEntryOffset = replacementsFile.getCursorOffset();
                replacementsFile.writeLong(0);//reserve space for replacement length entry. //TODO skip faster?
                long newObjectIDOffset = replacementsFile.getCursorOffset();
               
                replacementsFile.writeShort(objIdWithRedirectionBit);//write new ID to replacements file
                writeEntryLenForID(objId,objectBodyLength,replacementsFile);//write length of replacements file, could be bigger than actual object's data occupies
               
                long newObjectBodyOffset = replacementsFile.getCursorOffset();
                //return to write actual length of replacement entry
                replacementsFile.seek(replacementLengthEntryOffset);
                replacementsFile.writeLong(newObjectBodyOffset-newObjectIDOffset+objectBodyLength);
                replacementsFile.seek(newObjectBodyOffset);//back to the header end
               
                transactionFile.transferTo(objectBodyOffset, objectBodyLength, replacementsFile.getChannel());
                transactionFile.seek(objectIDOffset);//return position in transaction file to the start of object(like it wasn't here)
                transactionFile.setLength(objectIDOffset);//truncate "new data" file
                objectIDOffset = newObjectIDOffset;//this now offset in replacements file
                objectBodyOffset = newObjectBodyOffset;
                objectBodyLength = existingObjectHeaderData.getBodyLength();//length for new object
                transactionFile = replacementsFile;
                replacementsFile.resetToEnd();//replacements file to the end
                objectEndOffset = replacementsFile.getCursorOffset();
            }else{
                if(redirectorOffset!=-1){
                    //this is record under redirection offset
                    deleteObject(ioTicket, session, existingObjectHeaderData.getOffset(), tContainer);
                }
                IRandomAccessDataBuffer replacementsFile = tContainer.getTransactionReplacementsDataFile();
                long offset = tHandle.getHandle().getObjectEntryOffset();//offset of record that will be replaced with redirector
                //backupObject(ioTicket, offset, tContainer);
                //write redirector entry with relative offset
                replacementsFile.writeByte(TRANSACTION_REPLACEMENT_ENTRY_TYPE_REDIRECTOR);
                replacementsFile.writeLong(offset);
                replacementsFile.writeLong(objectIDOffset);//relative offset in new data transaction file
            }
            dataContainersCache.pushObjectDataContainer(existingObjectHeaderData);
        }
       
        for (int i = 0; i < fieldsWithRelativeAddr.size(); i++) {
            ObjectFieldRecord next = fieldsWithRelativeAddr.elementAt(i);
            next._offset = assembleTransactionDataForObject(context, next._value , tContainer);
//            if(JODBIOUtils.isAbsoluteOffset(next._offset)){
//                throw new IOException("internal transaction error");
//            }
        }
       
        if(classDescr.isArray() && !classDescr.isPrimitiveArray()){
            int arrayLength = Array.getLength(objectToPersist);
            for (int i = 0; i < arrayLength; i++) {
                Object value = Array.get(objectToPersist, i);
                if (value == null) {
                    continue;
                }
                TransactionHandle transactionHandle = transactionObjects.get(value);
                if(transactionHandle == null || transactionHandle.isTranslated()){
                    continue;
                }
                if(transactionHandle.isNewObject()){//only write new objects as we need relative offset, the offset for existing objects already known
                    assembleTransactionDataForObject(context, value , tContainer);
                }
            }
        }
       
        transactionFile.seek(objectIDOffset+2);
       
        writeEntryLenForID(objId,objectBodyLength,transactionFile);//TODO make sure the same size estimate is used

       
        if(fieldsWithRelativeAddr.size() > 0){
            transactionFile.seek(objectIDOffset+objectsWithRelativeAddrStartOffsetShift);
//            if(JODBConfig.DEBUG){
//                _logger.info("Transaction: Object "+rootObject.getClass()+" "+rootObject+" fields with relative pos ="+transactionFile.getCursorOffset());
//            }
        }
        for (int i = 0; i < fieldsWithRelativeAddr.size(); i++) {
            ObjectFieldRecord next = fieldsWithRelativeAddr.elementAt(i);
            int id = base.getOrSetFieldSubstitutionID(next._field);
            transactionFile.writeShort(id);
            transactionFile.writeInt((int)(next._offset - transactionFile.getCursorOffset()-4));//4 bytes to assume the position after offset entry
        }
       
       
        if(classDescr.isArray() && !classDescr.isPrimitiveArray()){
            transactionFile.seek(objectIDOffset+arrayDataShift);
            int arrayLength = Array.getLength(objectToPersist);
            int slotMask = 0;
            int slotCounter = 0;
            for (int i = 0; i < arrayLength; i++, slotCounter++) {
                if(slotCounter == 8){
                    transactionFile.writeByte(slotMask);
                    slotCounter = 0;
                    slotMask = 0;
                }
                Object value = Array.get(objectToPersist, i);
                TransactionHandle cellValueTransactionHandle;
                if (value == null || (cellValueTransactionHandle = transactionObjects.get(value))==null) {
                    //transaction handle can be null only if this object is last in depth
                    if (arrayElementSize == 4) {
                        transactionFile.writeInt(0);
                    } else {
                        transactionFile.writeLong(0);
                    }
                    continue;
                }
                if(cellValueTransactionHandle.isNewObject()&!cellValueTransactionHandle.isTranslated()){
                    throw new IOException();
                }
                long offset;
                boolean absoluteOffset;
                if(!cellValueTransactionHandle.isNewObject()){
                    offset = cellValueTransactionHandle.getHandle().getObjectEntryOffset();
                    absoluteOffset = true;
                    if(offset > MAX_ABSOLUTE_SHORT_ADDR && arrayElementSize == 4){
                        if(tHandle.isNewObject()){
                            //try relative address
                            if(context.getTransactionOffset() - offset > TRANSACTION_SIZE_LIMIT){
                                throw new JodbIOException("Illegal array size estimation TRANSACTION_SIZE_LIMIT");
                            }
                            offset = offset - (context.getTransactionOffset()+transactionFile.getCursorOffset()+ arrayElementSize);
                            absoluteOffset = false;
                        }else{
                            throw new JodbIOException("Illegal array size estimation");
                        }
                    }
                }else{
                    if(tHandle.isNewObject()){//definitely relative offset
                        offset = cellValueTransactionHandle.getTransactionOffset() - (transactionFile.getCursorOffset()+arrayElementSize);
                        absoluteOffset = false;
                    }else{//only absolute addr from here
                        offset = cellValueTransactionHandle.getTransactionOffset();
                        if(arrayElementSize == 4 && offset > MAX_ABSOLUTE_SHORT_ADDR - TRANSACTION_SIZE_LIMIT ){
                            throw new JodbIOException("Illegal array size estimation > MAX_ABSOLUTE_SHORT_ADDR - TRANSACTION_SIZE_LIMIT");
                        }
                        offset+=context.getTransactionOffset();
                        absoluteOffset = true;
                    }
                   
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    private void lockFile(File file) throws IOException{
        _fileLockHolder = new RandomAccessFile(file,"rw");
        _fileLock = _fileLockHolder.getChannel().tryLock(0,1,false);
        if(_fileLock == null){
            throw new JodbIOException("Unable to obtain file lock for "+file);
        }
    }
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