Package com.compomics.util.preferences.gui

Examples of com.compomics.util.preferences.gui.ProcessingPreferencesDialog


     * Open the ProcessingPreferences dialog.
     *
     * @param evt
     */
    private void editPreferencesButtonActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_editPreferencesButtonActionPerformed
        new ProcessingPreferencesDialog(peptideShakerGUI, true, processingPreferences, ptmScoringPreferences);
        if (processingPreferences.getProteinFDR() != 1
                || processingPreferences.getPeptideFDR() != 1
                || processingPreferences.getPsmFDR() != 1
                || ptmScoringPreferences.getFlrThreshold() != 1
                || ptmScoringPreferences.isProbabilisticScoreNeutralLosses()
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     * Open the ProcessingPreferencesDialog.
     *
     * @param evt
     */
    private void processingParametersMenuItemActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_processingParametersMenuItemActionPerformed
        new ProcessingPreferencesDialog(this, false, getProcessingPreferences(), getPtmScoringPreferences());
    }//GEN-LAST:event_processingParametersMenuItemActionPerformed
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