Package com.cloudera.lib.service

Examples of com.cloudera.lib.service.Instrumentation$Variable

78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
  public void testReadCompressedByte() throws IOException {
    // actually doesnt seem to be compressed ??

    NetcdfFile ncfile = TestH5.openH5("msg/MSG1_8bit_HRV.H5");
    Variable dset = ncfile.findVariable("image1/image_preview");
    assert dset != null;
    assert(dset.getDataType() == DataType.BYTE);

    assert(dset.getRank() == 2);
    assert(dset.getShape()[0] == 64);
    assert(dset.getShape()[1] == 96);

    // read entire array
    Array A = dset.read();
    assert(A.getRank() == 2);
    assert(A.getShape()[0] == 64);
    assert(A.getShape()[1] == 96);

    byte[] firstRow = new byte[] {
View Full Code Here
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
  }

  public void testEndian() throws IOException {
    String testDir = TestN4.testDir;
    NetcdfFile ncfile = TestNC2.open(testDir+"endianTest.nc4");
    Variable v = ncfile.findVariable("TMP");
    assert v != null;
    assert v.getDataType() == DataType.FLOAT;

    Array data = v.read();
    assert data.getElementType() == float.class;

    //large values indicate incorrect inflate or byte swapping
    while (data.hasNext()) {
      float val = data.nextFloat();
View Full Code Here
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
  }

  public void testReadArrayType() throws IOException {
    NetcdfFile ncfile = TestH5.openH5("support/SDS_array_type.h5");

    Variable dset = null;
    assert(null != (dset = ncfile.findVariable("IntArray")));
    assert(dset.getDataType() == DataType.INT);

    assert(dset.getRank() == 3);
    assert(dset.getShape()[0] == 10);
    assert(dset.getShape()[1] == 5);
    assert(dset.getShape()[2] == 4);

    // read entire array
    Array A;
    try {
      A = dset.read();
    }
    catch (IOException e) {
      System.err.println("ERROR reading file");
      assert(false);
      return;
    }
    assert(A.getRank() == 3);

    Index ima = A.getIndex();
    int[] shape = A.getShape();

    for (int i = 0; i < shape[0]; i++)
      for (int j = 0; j < shape[1]; j++)
        for (int k = 0; k < shape[2]; k++)
          if (A.getInt(ima.set(i, j, k)) != i) {
            assert false;
          }


          // read part of array
    dset.setCachedData(null, false); // turn off caching to test read subset
    dset.setCaching(false);
    int[] origin2 = new int[3];
    int[] shape2 = new int[] {
        10, 1, 1};
    try {
      A = dset.read(origin2, shape2);
    }
    catch (InvalidRangeException e) {
      System.err.println("ERROR reading file " + e);
      assert(false);
      return;
View Full Code Here
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
  }

  public void testVlengthVariableChunked() throws IOException {
    NetcdfFile ncfile = TestH5.openH5("support/uvlstr.h5");

    Variable v = ncfile.findVariable("Space1");
    assert (null != v);
    assert (v.getDataType() == DataType.STRING);
    assert (v.getRank() == 1);
    assert (v.getShape()[0] == 9);

    try {
      Array data = v.read();
      assert (data.getElementType() == String.class);
      assert (data instanceof ArrayObject);
      IndexIterator iter = data.getIndexIterator();
      while (iter.hasNext()) {
        out.println(iter.next());
      }

    } catch (IOException e) {
      e.printStackTrace();
      assert false;
    }

    int[] origin = new int[]{3};
    int[] shape = new int[]{3};
    try {
      Array data2 = v.read(origin, shape);
      Index ima = data2.getIndex();
      assert (data2.getElementType() == String.class);
      assert (data2 instanceof ArrayObject);
      assert ((String) data2.getObject(ima.set(0))).startsWith("testing whether that nation");
      assert ((String) data2.getObject(ima.set(1))).startsWith("O Gloria inmarcesible!");
View Full Code Here
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
  } // */

  public void testVlengthVariable() throws IOException {
    NetcdfFile ncfile = TestH5.openH5("support/vlslab.h5");

    Variable v = ncfile.findVariable("Space1");
    assert (null != v);
    assert (v.getDataType() == DataType.STRING);
    assert (v.getRank() == 1);
    assert (v.getShape()[0] == 12);

    try {
      Array data = v.read();
      assert (data.getElementType() == String.class);
      assert (data instanceof ArrayObject);
      IndexIterator iter = data.getIndexIterator();
      while (iter.hasNext()) {
        out.println(iter.next());
      }

    } catch (IOException e) {
      assert false;
    }

    int[] origin = new int[]{4};
    int[] shape = new int[]{1};
    try {
      Array data2 = v.read(origin, shape);
      Index ima = data2.getIndex();
      assert (data2.getElementType() == String.class);
      assert (data2 instanceof ArrayObject);
      assert ((String) data2.getObject(ima.set(0))).equals("Five score and seven years ago our forefathers brought forth on this continent a new nation,");
    }
View Full Code Here
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
  }

  private void testVlenEndian(String filename, int n) throws IOException {
    NetcdfFile ncfile = NetcdfDataset.openFile(filename, null);

    Variable v = ncfile.findVariable("levels");
    assert (null != v);
    assert (v.getDataType() == DataType.INT);
    assert (v.getRank() == 2);
    assert (v.getShape()[0] == n) : v.getShape()[0];

    try {
      Array data = v.read();
      // assert(data.getElementType() instanceof ucar.ma2.ArrayInt.class) : data.getElementType();
      assert (data instanceof ArrayObject);
      IndexIterator iter = data.getIndexIterator();
      while (iter.hasNext()) {
        Array inner = (Array) iter.next();
View Full Code Here
50
51
52
53
54
55
56
57
  }

  public void test1() throws IOException {
    //H5header.setDebugFlags( new ucar.nc2.util.DebugFlagsImpl("H5header/header"));
    NetcdfFile ncfile = TestH5.open(testDir +"HIRDLS1_v4.0.2a-aIrix-c2_2003d106.he5");
    Variable dset = ncfile.findVariable("HDFEOS/SWATHS/HIRDLS_L1_Swath/Data Fields/Scaled Ch01 Radiance");
    dset.read();
  }
View Full Code Here
56
57
58
59
60
61
62
63
64
65
66
    dset.read();
  }

  public void test2() throws IOException {
    NetcdfFile ncfile = TestH5.open(testDir +"HIRDLS2-AFGL_b027_na.he5");
    Variable dset = ncfile.findVariable("HDFEOS/SWATHS/HIRDLS/Data Fields/Altitude");
   
    //H5header.setDebugFlags( new ucar.nc2.util.DebugFlagsImpl("H5header/dataBtree"));
    Array data = dset.read();
    assert data.getElementType() == float.class;
  }
View Full Code Here
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
    //NetcdfFile ncfile = TestH5.open("c:/data/hdf5/HIRDLS/HIRDLS2_v0.3.1-aIrix-c3_2003d106.h5");
    NetcdfFile ncfile = TestH5.open(testDir +"HIRDLS2-Aura73p_b029_2000d275.he5");

    Group root = ncfile.getRootGroup();
    Group g = root.findGroup("HDFEOS INFORMATION");
    Variable dset = g.findVariable("StructMetadata.0");
    assert(null != dset );
    assert(dset.getDataType() == DataType.CHAR);

    // read entire array
    Array A;
    try {
      A = dset.read();
    }
    catch (IOException e) {
      System.err.println("ERROR reading file");
      assert(false);
      return;
    }
    assert(A.getRank() == 1);
    assert (A instanceof ArrayChar);

    ArrayChar ca = (ArrayChar) A;
    String sval = ca.getString();
    System.out.println(dset.getFullName());
    System.out.println(" Length = "+sval.length());
    System.out.println(" Value = "+sval);

    ////////////////
    dset = g.findVariable("coremetadata.0");
    assert(null != dset );
    assert(dset.getDataType() == DataType.CHAR);

    // read entire array
    try {
      A = dset.read();
    }
    catch (IOException e) {
      System.err.println("ERROR reading file");
      assert(false);
      return;
    }
    assert(A.getRank() == 1);
    assert (A instanceof ArrayChar);

    ca = (ArrayChar) A;
    sval = ca.getString();
    System.out.println(dset.getFullName());
    System.out.println(" Length = "+sval.length());
    System.out.println(" Value = "+sval);
  }
View Full Code Here
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
    /**
     * _more_
     */
    public void init() {
        Variable t       = ds.findVariable("time");
        Variable ele     = ds.findVariable("elevation");
        Variable azi     = ds.findVariable("azimuth");
        Variable rng     = ds.findVariable("range");
        Variable sidx0   = ds.findVariable("sweep_start_ray_index");
        Variable sidx1   = ds.findVariable("sweep_end_ray_index");
        Variable snumber = ds.findVariable("sweep_number");

        setEarthLocation();
        try {
            Array tArray = t.read();
            time = (double[]) tArray.copyTo1DJavaArray();
            Array eArray = ele.read();
            elevation = (float[]) eArray.copyTo1DJavaArray();
            Array aArray = azi.read();
            azimuth = (float[]) aArray.copyTo1DJavaArray();
            Array rArray = rng.read();
            range       = (float[]) rArray.copyTo1DJavaArray();
            rayStartIdx = (int[]) sidx0.read().copyTo1DJavaArray();
            rayEndIdx   = (int[]) sidx1.read().copyTo1DJavaArray();
            Array sn = snumber.read();
            nsweeps = ((int[]) sn.copyTo1DJavaArray()).length;

            setTimeUnits();
        } catch (Exception e) {
            throw new RuntimeException(e);
View Full Code Here
TOP

Related Classes of com.cloudera.lib.service.Instrumentation$Variable

  • cnslab.cnsnetwork.PlotResult
  • com.cloudera.lib.service.hadoop.HadoopService
  • com.cloudera.lib.service.instrumentation.TestInstrumentationService
  • com.intellij.psi.PsiElement
  • net.sf.mzmine.modules.rawdatamethods.rawdataimport.fileformats.NetCDFReadTask
  • org.eclipse.php.internal.core.codeassist.templates.CodeCompletionRequestor
  • org.geoserver.wcs.responses.NetCDFOutputManager
  • org.geppetto.core.simulator.UpdateRecordingStateTreeVisitor
  • ucar.nc2.dataset.conv.CEDRICRadarConvention
  • ucar.nc2.dataset.conv.DefaultConvention
    • Copyright © 2018 www.massapicom. All rights reserved.
    All source code are property of their respective owners. Java is a trademark of Sun Microsystems, Inc and owned by ORACLE Inc. Contact coftware#gmail.com.