Examples of bsh.NameSpace$Variable

ucar.nc2.Variable
A namespace in which methods, variables, and imports (class names) live. This is package public because it is used in the implementation of some bsh commands. However for normal use you should be using methods on bsh.Interpreter to interact with your scripts.
A bsh.This object is a thin layer over a NameSpace that associates it with an Interpreter instance. Together they comprise a Bsh scripted object context.
Note: I'd really like to use collections here, but we have to keep this compatible with JDK1.1


  public void problemV() throws IOException {
    H5header.setDebugFlags(new ucar.nc2.util.DebugFlagsImpl("H5header/header"));
    String filename = testDir + "ssec-h5/MYD04_L2.A2006188.1830.005.2006194121515.hdf";
    NetcdfFile ncfile = NetcdfFile.open(filename);
    Variable v = ncfile.findVariable("/U-MARF/EPS/IASI_xxx_1C/DATA/SPECT_LAT_ARRAY");
    Array data = v.read();
    System.out.println("\n**** testReadNetcdf4 done\n\n" + ncfile);
    NCdump.printArray(data, "primary_cloud", System.out, null);
    ncfile.close();
  }

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    String units = ds.findAttValueIgnoreCase(ctv, "units", null);
    if (units == null) {
      List<CoordinateAxis> axes = ds.getCoordinateAxes();
      for (CoordinateAxis axis : axes) {
        if (axis.getAxisType() == AxisType.GeoX) { // kludge - what if there's multiple ones?
          Variable v = axis.getOriginalVariable(); // LOOK why original variable ?
          units = v.getUnitsString();
          break;
        }
      }
    }

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    // H5header.setDebugFlags( new ucar.nc2.util.DebugFlagsImpl("H5header/header"));


    // actually bogus - apparently all filters arre turned off
    // but its a test of filtered data with no filter actually applied
    NetcdfFile ncfile = TestH5.openH5("support/zip.h5");
    Variable v = ncfile.findVariable("Data/Compressed_Data");
    assert v != null;
    Array data = v.read();
    int[] shape = data.getShape();
    assert shape[0] == 1000;
    assert shape[1] == 20;


    Index ima = data.getIndex();

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  public void test2() throws IOException {
    //H5header.setDebugFlags( new ucar.nc2.util.DebugFlagsImpl("H5header/header"));


    // probably bogus also, cant find any non-zero filtered variables
    NetcdfFile ncfile = TestH5.openH5("wrf/wrf_input_seq.h5");
    Variable v = ncfile.findVariable("DATASET=INPUT/GSW");
    assert v != null;
    Array data = v.read();
    int[] shape = data.getShape();
    assert shape[0] == 1;
    assert shape[1] == 20;
    assert shape[2] == 10;
  }

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  public void testDeflate() throws IOException {
    //H5header.setDebugFlags( new ucar.nc2.util.DebugFlagsImpl("H5header/header"));
    NetcdfFile ncfile = TestH5.openH5("msg/MSG1_8bit_HRV.H5");


    // picture looks ok in ToolsUI
    Variable v = ncfile.findVariable("image1/image_data");
    assert v != null;
    Array data = v.read();
    int[] shape = data.getShape();
    assert shape[0] == 1000;
    assert shape[1] == 1500;
  }

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  public void testMissing() throws IOException {
    //H5header.setDebugFlags( new ucar.nc2.util.DebugFlagsImpl("H5header/header"));
    NetcdfFile ncfile = TestH5.openH5("HIRDLS/HIRDLS2-AFGL_b027_na.he5");


    // picture looks ok in ToolsUI
    Variable v = ncfile.findVariable("HDFEOS/SWATHS/HIRDLS/Data Fields/Altitude");
    assert v != null;
    Array data = v.read();
    int[] shape = data.getShape();
    assert shape[0] == 6;
    assert shape[1] == 145;
  }

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      if ( !addAxisType( ds, "latitude", AxisType.Lat)) { // directly named


        String vname = ds.findAttValueIgnoreCase(null, "latitude_coordinate", null);
        if (!addAxisType( ds, vname, AxisType.Lat)) { // attribute named


          Variable v = hasUnits(ds, "degrees_north,degrees_N,degreesN,degree_north,degree_N,degreeN");
          if (v != null)
            addAxisType( v, AxisType.Lat); // CF-1
        }
      }
    }


    // longitude
    if (!hasAxisType( ds, AxisType.Lon)) { // already has _CoordinateAxisType


      if ( !addAxisType( ds, "longitude", AxisType.Lon)) { // directly named


        String vname = ds.findAttValueIgnoreCase(null, "longitude_coordinate", null);
        if (!addAxisType( ds, vname, AxisType.Lon)) { // attribute named


          Variable v = hasUnits(ds, "degrees_east,degrees_E,degreesE,degree_east,degree_E,degreeE");
          if (v != null)
            addAxisType( v, AxisType.Lon); // CF-1
        }
      }
    }

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  }




  private boolean addAxisType(NetcdfDataset ds, String vname, AxisType a) {
    if (vname == null) return false;
    Variable v = ds.findVariable(vname);
    if (v == null) return false;
    addAxisType( v, a);
    return true;
  }

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   } Compound String(10);
   */
  public void testStructureArray() throws IOException {
    NetcdfFile ncfile = TestH5.openH5("support/cstr.h5");


    Variable v = ncfile.findVariable("Compound String");
    assert( null != v);
    assert( v.getDataType() == DataType.STRUCTURE);
    assert( v instanceof Structure);
    assert( v.getRank() == 1);
    assert( v.getShape()[0] == 10);


      Array data = v.read();
      assert(data.getElementType() == StructureData.class);
      assert (data instanceof ArrayStructure);
      assert (data.getSize() == 10);
      assert (data.getRank() == 1);

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   type = Layout(8);  type= 2 (chunked) storageSize = (3,16) dataSize=0 dataAddress=1576
   */
  public void testStructureArrayChunked() throws IOException {
    NetcdfFile ncfile = TestH5.openH5("support/cuslab.h5");


    Variable v = ncfile.findVariable("ArrayOfStructures");
    assert( null != v);
    assert( v.getDataType() == DataType.STRUCTURE);
    assert( v instanceof Structure);
    assert( v.getRank() == 1);
    assert( v.getShape()[0] == 30);


    Array data = null;
    try {
      data = v.read();
    } catch (IOException e) { assert false; } // */


    assert(data.getElementType() == StructureData.class);
    assert (data instanceof ArrayStructure);
    assert (data.getSize() == 30);

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