Examples of BedExporterParam

Examples of fork.lib.bio.anno.genomic.BedExporterParam

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                gr.setValue(0);
                gbout.add(gr);
            }
        }
    }
    BedExporterParam bep= new BedExporterParam();
    bep.ifExpanded=true;
    BedExporter be= new BedExporter(gbout, bep);
    be.writeToFile(out);
}
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Examples of fork.lib.bio.anno.genomic.BedExporterParam

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        }
    }
}

public void writeToFile(File out)throws Exception{
    BedExporterParam par= new BedExporterParam();
    par.ifExpanded=true;
    BedExporter be= new BedExporter(gb, par){
        protected String column6On(GenomicRegion gr)throws Exception{
            Res r= ress.get(gr);
            return r.str+"\t"+f(r.forl)+"\t"+f(r.forh)+"\t"+f(r.revl)+"\t"+f(r.revh);
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