Examples of ARPACK


Examples of com.github.fommil.netlib.ARPACK

        c     pairs are kept together and the associated Ritz estimates are located in
        c     WORKL(IPNTR(8)), WORKL(IPNTR(8)+1), ... , WORKL(IPNTR(8)+NCV-1).
        c
        c-----------------------------------------------------------------------
         */
      ARPACK arpack = ARPACK.getInstance();
      do
        {
            arpack.dnaupd(ido, bmat, n, which, nev, tol, resid, ncv, v, n, iparam, ipntr, workd,
                    workl, lworkl, info);

            // The algorithm is done => skip the rest of the loop
            if (ido.val == 99)
            {
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Examples of org.netlib.arpack.ARPACK

   * Please refer to the ARPACK guide for more information.
   *
   */
  @Override
  public Eigenvalues run() {
    ARPACK arpack = ARPACK.getInstance();
    /*
     * Setting up parameters for DSAUPD call.
     *
     */
    intW ido = new intW(0); // must start zero
    String bmat = "I"; // standard problem
    doubleW tol = new doubleW(0); // uses machine precision
    intW info = new intW(0); // request random starting vector
    double[] resid = new double[n]; // allocate starting vector
    /*
     * NVC is the largest number of basis vectors that will
     * be used in the Implicitly Restarted Arnoldi Process.
     * Work per major iteration is proportional to N*NCV*NCV. 
     *
     */
    int ncv = Math.min(nev * 4, n); // rule of thumb use twice nev
    double[] v = new double[n * ncv];
    double[] workd = new double[3*n];
    double[] workl = new double[ncv*(ncv+8)];
    // Parameters
    int[] iparam = new int[11];
    {
      int ishfts = 1; // use the exact shift strategy
      int maxitr = 300; // max number of Arnoldi iterations
      int mode = 1; // use "mode 1"
      iparam[1-1] = ishfts;
      iparam[3-1] = maxitr;
      iparam[7-1] = mode;
    }
    int[] ipntr = new int[11];
    // debug setting
    org.netlib.arpack.arpack_debug.ndigit.val = -3;
    org.netlib.arpack.arpack_debug.logfil.val = 6;
    org.netlib.arpack.arpack_debug.msgets.val = 0;
    org.netlib.arpack.arpack_debug.msaitr.val = 0;
    org.netlib.arpack.arpack_debug.msapps.val = 0;
    org.netlib.arpack.arpack_debug.msaupd.val = 0;
    org.netlib.arpack.arpack_debug.msaup2.val = 0;
    org.netlib.arpack.arpack_debug.mseigt.val = 0;
    org.netlib.arpack.arpack_debug.mseupd.val = 0;
    /*
     * Main loop (reverse communication loop)
     *
     * Repeatedly calls the routine DSAUPD and takes
     * actions indicated by parameter IDO until either
     * convergence is indicated or maxitr has been
     * exceeded.
     *
     */
    assert n > 0;
    assert nev > 0;
    assert ncv > nev && ncv <= n;
    while (true) {
      arpack.dsaupd(
          ido, // reverse communication parameter
          bmat, // "I" = standard problem
          n, // problem size
          which.name(), // which values are requested?
          nev, // who many values?
          tol, // 0 = use machine precision
          resid,
          ncv,
          v,
          n,
          iparam,
          ipntr,
          workd,
          workl,
          workl.length,
          info );
      if (!(ido.val == 1 || ido.val == -1)) break;
      /* Perform matrix vector multiplication
       *
       *    y <--- OP*x
       *
       * The user should supply his own matrix-
       * vector multiplication routine here that
       * takes workd(ipntr(1)) as the input, and
       * return the result to workd(ipntr(2)).  
       *
       */
      int x0 = ipntr[1-1]-1; // Fortran is off-by-one compared to Java!
      int y0 = ipntr[2-1]-1;
      Vector x = Vector.copy(workd, x0, n);
      Vector y = this.callback(x);
      assert y.size() == n;
      y.storeOn(workd, y0);  
    }
    /*
     * Either we have convergence or there is an error.
     *  
     */
    if (info.val != 0) throw new Error("dsaupd ERRNO = "+info.val
        +", see http://www.caam.rice.edu/software/ARPACK/UG/node136.html");
    /*
     * Post-Process using DSEUPD.
     *
     * Computed eigenvalues may be extracted.
     *
     * The routine DSEUPD now called to do this
     * post processing (other modes may require
     * more complicated post processing than
     * "mode 1").
     *
     */
    boolean rvec = true; // request vectors
    boolean[] select = new boolean[ncv];
    double[] d = new double[ncv * 2];
    double sigma = 0; // not used in "mode 1"
    intW ierr = new intW(0);
    intW nevW = new intW(nev);
    arpack.dseupd(
        rvec,
        "All",
        select,
        d,
        v,
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