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package data.cerevisiae.histmod.guillemett2011_h3k4;
import fork.lib.base.file.management.Dirs;
import fork.lib.bio.anno.genomic.BedGraphExporter;
import fork.lib.bio.anno.genomic.BedGraphReader;
import fork.lib.bio.anno.genomic.LandscapeBuilder;
import fork.lib.bio.anno.genomic.LandscapeTransformer;
import fork.lib.bio.anno.genomic.region.GenomicRegionsBuilder;
import java.io.File;
/**
*
* @author man-mqbpjmg4
*/
public class Unlog {
public static void main(String[] args) throws Exception { //debug
File dir= Dirs.getFile("dir");
File d= new File(dir+"/other_datasets/guillemette_2011_h4k3me3-ac");
//File f= new File(d+"/h3k4me3_guillemette2012.wig");
File f= new File(d+"/h3k4ac_guillemette2011.wig");
LandscapeBuilder lb= new BedGraphReader(f).getLandscapeBuilder();
LandscapeTransformer lt= new LandscapeTransformer(lb);
lt.unlog(2);
File of= new File(d+"/unlog2_"+ f.getName());
new BedGraphExporter(lb).writeToFile(of);
}
}