Package search.util

Source Code of search.util.TreeLoader

/*
* Copyright (c) 2010 Mathew Hall, University of Sheffield.
* All rights reserved.
*
* Redistribution and use in source and binary forms, with or
* without modification, are permitted provided that the following conditions
* are met:
*
* Redistributions of source code must retain the above copyright
* notice, this list of conditions and the following disclaimer.
*
* Redistributions in binary form must reproduce the above
* copyright notice, this list of conditions and the following
* disclaimer in the documentation and/or other materials provided
* with the distribution.
*
* Neither the name of the University of Sheffield nor the names of its
* contributors may be used to endorse or promote products derived
* from this software without specific prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND
* CONTRIBUTORS "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES,
* INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF
* MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
* DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR
* CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
* SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT
* NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES;
* LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION)
* HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
* CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
* OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE,
* EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*
*/
package search.util;

import java.io.BufferedReader;
import java.io.File;
import java.io.FileReader;
import java.io.IOException;
import java.util.HashMap;
import java.util.logging.Level;
import java.util.logging.Logger;
import java.util.regex.Matcher;
import java.util.regex.Pattern;

import primitives.cluster.ClusterHead;
import primitives.graph.Graph;
import primitives.graph.Node;

//foo bar baz

public abstract class TreeLoader {

  static Pattern definitionLine = Pattern.compile("\\W*(.+?)\\W*\\[.*\\]");
 
  static Pattern transitionLine = Pattern.compile("\\W*\"?" + "([^\"]+)"
      + "\"?" + "\\W*" + "->" + "\\W*" + "\"?" + "([^\"]+)" + "\"?"
      + "\\W*" + "(\\[" + "(.*)" + "\\])?");

        public static ClusterHead loadTreeFromDot(File input) throws IOException{
            Graph g = new Graph();
            BufferedReader in = new BufferedReader(new FileReader(input));
            String line;
    HashMap<String, Node> nodes = new HashMap<String, Node>();

    while ((line = in.readLine()) != null) {
      if (line.matches("^\\W*#.*$"))
                            continue;
      Matcher m = definitionLine.matcher(line);
      if (m.matches()) {
        Matcher m2 = transitionLine.matcher(line);
        if (m2.matches()) {
          String s1 = m2.group(1);
          String s2 = m2.group(2);
          // String s3 = m2.group(3);
          nodes.put(s1, new Node(s1));
          nodes.put(s2, new Node(s2));
        } else {
          String s1 = m.group(1);
          nodes.put(s1, new Node(s1));
        }
      }
    }

    for (String k : nodes.keySet()) {
      g.addNode(nodes.get(k));
    }

    in = new BufferedReader(new FileReader(input));

    while ((line = in.readLine()) != null) {
      Matcher m = transitionLine.matcher(line);
      if (line.matches("^\\W*#.*$"))
        continue;
      if (m.matches()) {
                                Logger.getLogger(TreeLoader.class.getName()).log(Level.FINEST, String.format("Line \"%s\" matches definition",line));
        Matcher m2 = transitionLine.matcher(line);
        if (m2.matches()) {
          String s1 = m2.group(1);
          String s2 = m2.group(2);
          String s3 = m2.group(4);
         
            if (s3 == null)
              s3 = "";
                                                s3 = s3.replace("[", "");
                                                s3 = s3.replace("];", "");
                                                s3 = s3.replace("]","");
                                                s3 = s3.replace("[]","");
                                        try{
                                            nodes.get(s1).getLabel();
                                            nodes.get(s2).getLabel();
            nodes.get(s1).connect(nodes.get(s2), s3);
          }catch(NullPointerException npe){
                                            Logger.getLogger(TreeLoader.class.getName()).log(Level.WARNING, String.format("Tried to connect %s to %s via %s",s1,s2,s3), npe);
                                        }
        }
      }
    }

    return new ClusterHead(g);
        }
  public static ClusterHead loadTreeFromDotS(String input) {
    Graph g = new Graph();
    String[] lines = input.split("\r\n|\r|\n");
    HashMap<String, Node> nodes = new HashMap<String, Node>();

    for (String line : lines) {
      if (line.matches("^\\W*#.*$"))
        continue;
      Matcher m = definitionLine.matcher(line);
      if (m.matches()) {
        Matcher m2 = transitionLine.matcher(line);
        if (m2.matches()) {
          String s1 = m2.group(1);
          String s2 = m2.group(2);
          // String s3 = m2.group(3);
          nodes.put(s1, new Node(s1));
          nodes.put(s2, new Node(s2));
        } else {
          String s1 = m.group(1);
          nodes.put(s1, new Node(s1));
        }
      } else {

      }
    }

    for (String k : nodes.keySet()) {
      g.addNode(nodes.get(k));
    }

    for (String line : lines) {
      Matcher m2 = transitionLine.matcher(line);
      if (m2.matches()) {
        String s1 = m2.group(1);
        String s2 = m2.group(2);
        String s3 = m2.group(3);
        nodes.get(s1).connect(nodes.get(s2), s3);
      }
    }

    return new ClusterHead(g);

  }

  public static ClusterHead loadTreeFromDot(String filename)
      throws IOException {
   
                        return loadTreeFromDot(new File(filename));
   
   

  }
}
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