/***********************************************************************************************************************
*
* Copyright (C) 2010-2013 by the Stratosphere project (http://stratosphere.eu)
*
* Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with
* the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on
* an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the
* specific language governing permissions and limitations under the License.
*
**********************************************************************************************************************/
package eu.stratosphere.pact.runtime.sort;
import java.io.BufferedReader;
import java.io.BufferedWriter;
import java.io.File;
import java.io.FileReader;
import java.io.FileWriter;
import java.io.IOException;
import java.util.Random;
import org.junit.Assert;
import eu.stratosphere.api.common.typeutils.TypeComparator;
import eu.stratosphere.api.common.typeutils.TypeSerializer;
import eu.stratosphere.api.common.typeutils.base.StringComparator;
import eu.stratosphere.api.common.typeutils.base.StringSerializer;
import eu.stratosphere.api.java.tuple.Tuple2;
import eu.stratosphere.api.java.typeutils.TupleTypeInfo;
import eu.stratosphere.api.java.typeutils.TypeInfoParser;
import eu.stratosphere.api.java.typeutils.runtime.RuntimeStatelessSerializerFactory;
import eu.stratosphere.nephele.services.iomanager.IOManager;
import eu.stratosphere.nephele.services.memorymanager.MemoryManager;
import eu.stratosphere.nephele.services.memorymanager.spi.DefaultMemoryManager;
import eu.stratosphere.pact.runtime.test.util.DummyInvokable;
import eu.stratosphere.util.MutableObjectIterator;
public class MassiveStringSortingITCase {
private static final long SEED = 347569784659278346L;
@SuppressWarnings("unused")
private static final char LINE_BREAK = '\n';
public void testStringSorting() {
File input = null;
File sorted = null;
try {
// the source file
input = generateFileWithStrings(300000, "http://some-uri.com/that/is/a/common/prefix/to/all");
// the sorted file
sorted = File.createTempFile("sorted_strings", "txt");
String[] command = {"/bin/bash","-c","export LC_ALL=\"C\" && cat \"" + input.getAbsolutePath() + "\" | sort > \"" + sorted.getAbsolutePath() + "\""};
Process p = null;
try {
p = Runtime.getRuntime().exec(command);
int retCode = p.waitFor();
if (retCode != 0) {
throw new Exception("Command failed with return code " + retCode);
}
p = null;
} finally {
if (p != null) {
p.destroy();
}
}
// sort the data
UnilateralSortMerger<String> sorter = null;
BufferedReader reader = null;
BufferedReader verifyReader = null;
try {
MemoryManager mm = new DefaultMemoryManager(1024 * 1024);
IOManager ioMan = new IOManager();
TypeSerializer<String> serializer = StringSerializer.INSTANCE;
TypeComparator<String> comparator = new StringComparator(true);
reader = new BufferedReader(new FileReader(input));
MutableObjectIterator<String> inputIterator = new StringReaderMutableObjectIterator(reader);
sorter = new UnilateralSortMerger<String>(mm, ioMan, inputIterator, new DummyInvokable(),
new RuntimeStatelessSerializerFactory<String>(serializer, String.class), comparator, 1024 * 1024, 4, 0.8f);
MutableObjectIterator<String> sortedData = sorter.getIterator();
reader.close();
// verify
verifyReader = new BufferedReader(new FileReader(sorted));
String next;
while ((next = verifyReader.readLine()) != null) {
String nextFromStratoSort = sortedData.next("");
Assert.assertNotNull(nextFromStratoSort);
Assert.assertEquals(next, nextFromStratoSort);
}
}
finally {
if (reader != null) {
reader.close();
}
if (verifyReader != null) {
verifyReader.close();
}
if (sorter != null) {
sorter.close();
}
}
}
catch (Exception e) {
System.err.println(e.getMessage());
e.printStackTrace();
Assert.fail(e.getMessage());
}
finally {
if (input != null) {
input.delete();
}
if (sorted != null) {
sorted.delete();
}
}
}
@SuppressWarnings("unchecked")
public void testStringTuplesSorting() {
final int NUM_STRINGS = 300000;
File input = null;
File sorted = null;
try {
// the source file
input = generateFileWithStringTuples(NUM_STRINGS, "http://some-uri.com/that/is/a/common/prefix/to/all");
// the sorted file
sorted = File.createTempFile("sorted_strings", "txt");
String[] command = {"/bin/bash","-c","export LC_ALL=\"C\" && cat \"" + input.getAbsolutePath() + "\" | sort > \"" + sorted.getAbsolutePath() + "\""};
Process p = null;
try {
p = Runtime.getRuntime().exec(command);
int retCode = p.waitFor();
if (retCode != 0) {
throw new Exception("Command failed with return code " + retCode);
}
p = null;
} finally {
if (p != null) {
p.destroy();
}
}
// sort the data
UnilateralSortMerger<Tuple2<String, String[]>> sorter = null;
BufferedReader reader = null;
BufferedReader verifyReader = null;
try {
MemoryManager mm = new DefaultMemoryManager(1024 * 1024);
IOManager ioMan = new IOManager();
TupleTypeInfo<Tuple2<String, String[]>> typeInfo = (TupleTypeInfo<Tuple2<String, String[]>>) (TupleTypeInfo<?>) TypeInfoParser.parse("Tuple2<String, String[]>");
TypeSerializer<Tuple2<String, String[]>> serializer = typeInfo.createSerializer();
TypeComparator<Tuple2<String, String[]>> comparator = typeInfo.createComparator(new int[] { 0 }, new boolean[] { true } );
reader = new BufferedReader(new FileReader(input));
MutableObjectIterator<Tuple2<String, String[]>> inputIterator = new StringTupleReaderMutableObjectIterator(reader);
sorter = new UnilateralSortMerger<Tuple2<String, String[]>>(mm, ioMan, inputIterator, new DummyInvokable(),
new RuntimeStatelessSerializerFactory<Tuple2<String, String[]>>(serializer, (Class<Tuple2<String, String[]>>) (Class<?>) Tuple2.class), comparator, 1024 * 1024, 4, 0.8f);
// use this part to verify that all if good when sorting in memory
// List<MemorySegment> memory = mm.allocatePages(new DummyInvokable(), mm.computeNumberOfPages(1024*1024*1024));
// NormalizedKeySorter<Tuple2<String, String[]>> nks = new NormalizedKeySorter<Tuple2<String,String[]>>(serializer, comparator, memory);
//
// {
// Tuple2<String, String[]> wi = new Tuple2<String, String[]>("", new String[0]);
// while ((wi = inputIterator.next(wi)) != null) {
// Assert.assertTrue(nks.write(wi));
// }
//
// new QuickSort().sort(nks);
// }
//
// MutableObjectIterator<Tuple2<String, String[]>> sortedData = nks.getIterator();
MutableObjectIterator<Tuple2<String, String[]>> sortedData = sorter.getIterator();
reader.close();
// verify
verifyReader = new BufferedReader(new FileReader(sorted));
MutableObjectIterator<Tuple2<String, String[]>> verifyIterator = new StringTupleReaderMutableObjectIterator(verifyReader);
Tuple2<String, String[]> next = new Tuple2<String, String[]>("", new String[0]);
Tuple2<String, String[]> nextFromStratoSort = new Tuple2<String, String[]>("", new String[0]);
int num = 0;
while ((next = verifyIterator.next(next)) != null) {
num++;
nextFromStratoSort = sortedData.next(nextFromStratoSort);
Assert.assertNotNull(nextFromStratoSort);
if (nextFromStratoSort.f0.equals("http://some-uri.com/that/is/a/common/prefix/to/all(()HK;V3__.e*")) {
System.out.println("Found at position " + num);
}
Assert.assertEquals(next.f0, nextFromStratoSort.f0);
Assert.assertArrayEquals(next.f1, nextFromStratoSort.f1);
}
Assert.assertNull(sortedData.next(nextFromStratoSort));
Assert.assertEquals(NUM_STRINGS, num);
}
finally {
if (reader != null) {
reader.close();
}
if (verifyReader != null) {
verifyReader.close();
}
if (sorter != null) {
sorter.close();
}
}
}
catch (Exception e) {
System.err.println(e.getMessage());
e.printStackTrace();
Assert.fail(e.getMessage());
}
finally {
if (input != null) {
input.delete();
}
if (sorted != null) {
sorted.delete();
}
}
}
// --------------------------------------------------------------------------------------------
private static final class StringReaderMutableObjectIterator implements MutableObjectIterator<String> {
private final BufferedReader reader;
public StringReaderMutableObjectIterator(BufferedReader reader) {
this.reader = reader;
}
@Override
public String next(String reuse) throws IOException {
return reader.readLine();
}
}
private static final class StringTupleReaderMutableObjectIterator implements MutableObjectIterator<Tuple2<String, String[]>> {
private final BufferedReader reader;
public StringTupleReaderMutableObjectIterator(BufferedReader reader) {
this.reader = reader;
}
@Override
public Tuple2<String, String[]> next(Tuple2<String, String[]> reuse) throws IOException {
String line = reader.readLine();
if (line == null) {
return null;
}
String[] parts = line.split(" ");
reuse.f0 = parts[0];
reuse.f1 = parts;
return reuse;
}
}
// --------------------------------------------------------------------------------------------
private File generateFileWithStrings(int numStrings, String prefix) throws IOException {
final Random rnd = new Random(SEED);
final StringBuilder bld = new StringBuilder();
final int resetValue = prefix.length();
bld.append(prefix);
File f = File.createTempFile("strings", "txt");
BufferedWriter wrt = null;
try {
wrt = new BufferedWriter(new FileWriter(f));
for (int i = 0 ; i < numStrings; i++) {
bld.setLength(resetValue);
int len = rnd.nextInt(20) + 300;
for (int k = 0; k < len; k++) {
char c = (char) (rnd.nextInt(80) + 40);
bld.append(c);
}
String str = bld.toString();
wrt.write(str);
wrt.newLine();
}
} finally {
wrt.close();
}
return f;
}
private File generateFileWithStringTuples(int numStrings, String prefix) throws IOException {
final Random rnd = new Random(SEED);
final StringBuilder bld = new StringBuilder();
File f = File.createTempFile("strings", "txt");
BufferedWriter wrt = null;
try {
wrt = new BufferedWriter(new FileWriter(f));
for (int i = 0 ; i < numStrings; i++) {
bld.setLength(0);
int numComps = rnd.nextInt(5) + 1;
for (int z = 0; z < numComps; z++) {
if (z > 0) {
bld.append(' ');
}
bld.append(prefix);
int len = rnd.nextInt(20) + 10;
for (int k = 0; k < len; k++) {
char c = (char) (rnd.nextInt(80) + 40);
bld.append(c);
}
}
String str = bld.toString();
wrt.write(str);
wrt.newLine();
}
} finally {
wrt.close();
}
return f;
}
// --------------------------------------------------------------------------------------------
public static void main(String[] args) {
new MassiveStringSortingITCase().testStringSorting();
new MassiveStringSortingITCase().testStringTuplesSorting();
}
}