Package org.dspace.app.xmlui.aspect.administrative

Source Code of org.dspace.app.xmlui.aspect.administrative.FlowContainerUtils

/**
* The contents of this file are subject to the license and copyright
* detailed in the LICENSE and NOTICE files at the root of the source
* tree and available online at
*
* http://www.dspace.org/license/
*/
package org.dspace.app.xmlui.aspect.administrative;

import java.io.ByteArrayInputStream;
import java.io.IOException;
import java.io.InputStream;
import java.io.UnsupportedEncodingException;
import java.sql.SQLException;
import java.util.ArrayList;
import java.util.List;

import javax.xml.parsers.ParserConfigurationException;
import javax.xml.transform.TransformerException;

import org.apache.cocoon.environment.Request;
import org.apache.cocoon.servlet.multipart.Part;
import org.dspace.app.xmlui.utils.UIException;
import org.dspace.app.xmlui.wing.Message;
import org.dspace.authorize.AuthorizeException;
import org.dspace.authorize.AuthorizeManager;
import org.dspace.authorize.ResourcePolicy;
import org.dspace.browse.BrowseException;
import org.dspace.content.Collection;
import org.dspace.content.Community;
import org.dspace.harvest.HarvestedCollection;
import org.dspace.content.Item;
import org.dspace.content.ItemIterator;
import org.dspace.harvest.OAIHarvester;
import org.dspace.harvest.OAIHarvester.HarvestScheduler;
import org.dspace.content.crosswalk.CrosswalkException;
import org.dspace.core.ConfigurationManager;
import org.dspace.core.Constants;
import org.dspace.core.Context;
import org.dspace.curate.Curator;
import org.dspace.eperson.Group;
import org.dspace.xmlworkflow.Role;
import org.dspace.xmlworkflow.WorkflowConfigurationException;
import org.dspace.xmlworkflow.WorkflowUtils;
import org.jdom.JDOMException;
import org.jdom.input.SAXBuilder;
import org.xml.sax.SAXException;

/**
* Utility methods to processes actions on Communities and Collections.
*
* @author Scott Phillips
*/
public class FlowContainerUtils
{

  /** Possible Collection roles */
  public static final String ROLE_ADMIN       = "ADMIN";
  public static final String ROLE_WF_STEP1    = "WF_STEP1";
  public static final String ROLE_WF_STEP2    = "WF_STEP2";
  public static final String ROLE_WF_STEP3    = "WF_STEP3";
  public static final String ROLE_SUBMIT      = "SUBMIT";
  public static final String ROLE_DEFAULT_READ = "DEFAULT_READ";
 
 
  // Collection related functions

  /**
   * Process the collection metadata edit form.
   *
   * @param context The current DSpace context.
   * @param collectionID The collection id.
   * @param deleteLogo Determines if the logo should be deleted along with the metadata editing action.
   * @param request the Cocoon request object
   * @return A process result's object.
   */
  public static FlowResult processEditCollection(Context context, int collectionID, boolean deleteLogo, Request request) throws SQLException, IOException, AuthorizeException
  {
    FlowResult result = new FlowResult();
   
    Collection collection = Collection.find(context, collectionID);
   
    // Get the metadata
    String name = request.getParameter("name");
    String shortDescription = request.getParameter("short_description");
    String introductoryText = request.getParameter("introductory_text");
    String copyrightText = request.getParameter("copyright_text");
    String sideBarText = request.getParameter("side_bar_text");
    String license = request.getParameter("license");
    String provenanceDescription = request.getParameter("provenance_description");
   
    // If they don't have a name then make it untitled.
    if (name == null || name.length() == 0)
        {
            name = "Untitled";
        }

    // If empty, make it null.
    if (shortDescription != null && shortDescription.length() == 0)
        {
            shortDescription = null;
        }
    if (introductoryText != null && introductoryText.length() == 0)
        {
            introductoryText = null;
        }
    if (copyrightText != null && copyrightText.length() == 0)
        {
            copyrightText = null;
        }
    if (sideBarText != null && sideBarText.length() == 0)
        {
            sideBarText = null;
        }
    if (license != null && license.length() == 0)
        {
            license = null;
        }
    if (provenanceDescription != null && provenanceDescription.length() == 0)
        {
            provenanceDescription = null;
        }
   
    // Save the metadata
    collection.setMetadata("name", name);
    collection.setMetadata("short_description", shortDescription);
    collection.setMetadata("introductory_text", introductoryText);
    collection.setMetadata("copyright_text", copyrightText);
    collection.setMetadata("side_bar_text", sideBarText);
    collection.setMetadata("license", license);
    collection.setMetadata("provenance_description", provenanceDescription);
   
       
    // Change or delete the logo
        if (deleteLogo)
        {
          // Remove the logo
          collection.setLogo(null);
        }
        else
        {
          // Update the logo
        Object object = request.get("logo");
        Part filePart = null;
        if (object instanceof Part)
            {
                filePart = (Part) object;
            }

        if (filePart != null && filePart.getSize() > 0)
        {
          InputStream is = filePart.getInputStream();
         
          collection.setLogo(is);
        }
        }
       
        // Save everything
        collection.update();
        context.commit();
       
       
        // No notice...
        result.setContinue(true);
   
    return result;
  }
 
  /**
   * Process the collection harvesting options form.
   *
   * @param context The current DSpace context.
   * @param collectionID The collection id.
   * @param request the Cocoon request object
   * @return A process result's object.
   */
  public static FlowResult processSetupCollectionHarvesting(Context context, int collectionID, Request request) throws SQLException, IOException, AuthorizeException
  {
    FlowResult result = new FlowResult();
    HarvestedCollection hc = HarvestedCollection.find(context, collectionID);

    String contentSource = request.getParameter("source");

    // First, if this is not a harvested collection (anymore), set the harvest type to 0; possibly also wipe harvest settings 
    if (contentSource.equals("source_normal"))
    {
      if (hc != null)
            {
                hc.delete();
            }
     
      result.setContinue(true);
    }
    else
    {
      FlowResult subResult = testOAISettings(context, request);
     
      // create a new harvest instance if all the settings check out
      if (hc == null) {
        hc = HarvestedCollection.create(context, collectionID);
      }
     
      // if the supplied options all check out, set the harvesting parameters on the collection
      if (subResult.getErrors().isEmpty()) {
        String oaiProvider = request.getParameter("oai_provider");
        boolean oaiAllSets = "all".equals(request.getParameter("oai-set-setting"));
                String oaiSetId;
                if(oaiAllSets)
                {
                    oaiSetId = "all";
                }
                else
                {
                    oaiSetId = request.getParameter("oai_setid");
                }


        String metadataKey = request.getParameter("metadata_format");
        String harvestType = request.getParameter("harvest_level");
       
        hc.setHarvestParams(Integer.parseInt(harvestType), oaiProvider, oaiSetId, metadataKey);
        hc.setHarvestStatus(HarvestedCollection.STATUS_READY);
      }
      else {
        result.setErrors(subResult.getErrors());
        result.setContinue(false);
        return result;
      }
     
      hc.update();
    }
           
        // Save everything
        context.commit();
       
        // No notice...
        //result.setMessage(new Message("default","Harvesting options successfully modified."));
        result.setOutcome(true);
        result.setContinue(true);
   
    return result;
  }
 
 
  /**
   * Use the collection's harvest settings to immediately perform a harvest cycle.
   *
   * @param context The current DSpace context.
   * @param collectionID The collection id.
   * @param request the Cocoon request object
   * @return A process result's object.
   * @throws TransformerException
   * @throws SAXException
   * @throws ParserConfigurationException
   * @throws CrosswalkException
   */
  public static FlowResult processRunCollectionHarvest(Context context, int collectionID, Request request) throws SQLException, IOException, AuthorizeException, CrosswalkException, ParserConfigurationException, SAXException, TransformerException
  {
    FlowResult result = new FlowResult();
    OAIHarvester harvester;
    List<String> testErrors = new ArrayList<String>();
    Collection collection = Collection.find(context, collectionID);
    HarvestedCollection hc = HarvestedCollection.find(context, collectionID);

    //TODO: is there a cleaner way to do this?
    try {
      if (!HarvestScheduler.hasStatus(HarvestScheduler.HARVESTER_STATUS_STOPPED)) {
        synchronized(HarvestScheduler.lock) {
          HarvestScheduler.setInterrupt(HarvestScheduler.HARVESTER_INTERRUPT_INSERT_THREAD, collectionID);
          HarvestScheduler.lock.notify();
        }
      }
      else {
        harvester = new OAIHarvester(context, collection, hc);
        harvester.runHarvest();
      }
    }
    catch (Exception e) {
      testErrors.add(e.getMessage());
      result.setErrors(testErrors);
      result.setContinue(false);
      return result;
    }
   
        result.setContinue(true);
   
    return result;
  }
 
 
  /**
   * Purge the collection of all items, then run a fresh harvest cycle.
   *
   * @param context The current DSpace context.
   * @param collectionID The collection id.
   * @param request the Cocoon request object
   * @return A process result's object.
   * @throws TransformerException
   * @throws SAXException
   * @throws ParserConfigurationException
   * @throws CrosswalkException
   * @throws BrowseException
   */
  public static FlowResult processReimportCollection(Context context, int collectionID, Request request) throws SQLException, IOException, AuthorizeException, CrosswalkException, ParserConfigurationException, SAXException, TransformerException, BrowseException
  {
    Collection collection = Collection.find(context, collectionID);
    HarvestedCollection hc = HarvestedCollection.find(context, collectionID);
   
    ItemIterator it = collection.getAllItems();
    //IndexBrowse ib = new IndexBrowse(context);
    while (it.hasNext()) {
      Item item = it.next();
      //System.out.println("Deleting: " + item.getHandle());
      //ib.itemRemoved(item);
      collection.removeItem(item);
    }
    hc.setHarvestResult(null,"");
    hc.update();
    collection.update();
    context.commit();
   
    return processRunCollectionHarvest(context, collectionID, request);
  }
 
 
  /**
   * Test the supplied OAI settings.
   *
   * @param context
   * @param request
   */
  public static FlowResult testOAISettings(Context context, Request request
  {
    FlowResult result  = new FlowResult();
   
    String oaiProvider = request.getParameter("oai_provider");
    String oaiSetId = request.getParameter("oai_setid");
        oaiSetId = request.getParameter("oai-set-setting");
        if(!"all".equals(oaiSetId))
        {
            oaiSetId = request.getParameter("oai_setid");
        }
    String metadataKey = request.getParameter("metadata_format");
    String harvestType = request.getParameter("harvest_level");
    int harvestTypeInt = 0;
   
    if (oaiProvider == null || oaiProvider.length() == 0)
        {
            result.addError("oai_provider");
        }
    if (oaiSetId == null || oaiSetId.length() == 0)
        {
            result.addError("oai_setid");
        }
    if (metadataKey == null || metadataKey.length() == 0)
        {
            result.addError("metadata_format");
        }
    if (harvestType == null || harvestType.length() == 0)
        {
            result.addError("harvest_level");
        }
    else
        {
            harvestTypeInt = Integer.parseInt(harvestType);
        }
     
   
    if (result.getErrors() == null) {
      List<String> testErrors = OAIHarvester.verifyOAIharvester(oaiProvider, oaiSetId, metadataKey, (harvestTypeInt>1));
      result.setErrors(testErrors);
    }
   
    if (result.getErrors() == null || result.getErrors().isEmpty()) {
      result.setOutcome(true);
      // On a successful test we still want to stay in the loop, not continue out of it
      //result.setContinue(true);
      result.setMessage(new Message("default","Harvesting settings are valid."));
    }
    else {
      result.setOutcome(false);
      result.setContinue(false);
      // don't really need a message when the errors are highlighted already
      //result.setMessage(new Message("default","Harvesting is not properly configured."));
    }

    return result;
  }
 
  /**
   * Look up the id of the template item for a given collection.
   *
   * @param context The current DSpace context.
   * @param collectionID The collection id.
   * @return The id of the template item.
   * @throws IOException
   */
  public static int getTemplateItemID(Context context, int collectionID) throws SQLException, AuthorizeException, IOException
  {
    Collection collection = Collection.find(context, collectionID);
    Item template = collection.getTemplateItem();
   
    if (template == null)
    {
      collection.createTemplateItem();
      template = collection.getTemplateItem();
     
      collection.update();
      template.update();
      context.commit();
    }
   
    return template.getID();
  }

 
 
 
  /**
   * Look up the id of a group authorized for one of the given roles. If no group is currently
   * authorized to perform this role then a new group will be created and assigned the role.
   *
   * @param context The current DSpace context.
   * @param collectionID The collection id.
   * @param roleName ADMIN, WF_STEP1,  WF_STEP2, WF_STEP3,  SUBMIT, DEFAULT_READ.
   * @return The id of the group associated with that particular role, or -1 if the role was not found.
   */
  public static int getCollectionRole(Context context, int collectionID, String roleName) throws SQLException, AuthorizeException, IOException, TransformerException, SAXException, WorkflowConfigurationException, ParserConfigurationException {
    Collection collection = Collection.find(context, collectionID);
   
    // Determine the group based upon wich role we are looking for.
    Group roleGroup = null;
    if (ROLE_ADMIN.equals(roleName))
    {
      roleGroup = collection.getAdministrators();
      if (roleGroup == null){
        roleGroup = collection.createAdministrators();
            }
    }
    else if (ROLE_SUBMIT.equals(roleName))
    {
      roleGroup = collection.getSubmitters();
      if (roleGroup == null)
        roleGroup = collection.createSubmitters();
    }else{
            if(ConfigurationManager.getProperty("workflow","workflow.framework").equals("xmlworkflow")){//Resolve our id to a role
                roleGroup = getXMLWorkflowRole(context, collectionID, roleName, collection, roleGroup);
             }else{
                roleGroup = getOriginalWorkflowRole(roleName, collection, roleGroup);
            }

    }

    // In case we needed to create a group, save our changes
    collection.update();
    context.commit();

    // If the role name was valid then role should be non null,
    if (roleGroup != null)
      return roleGroup.getID();

    return -1;
    }
     
    private static Group getOriginalWorkflowRole(String roleName, Collection collection, Group roleGroup) throws SQLException, AuthorizeException {
        if (ROLE_WF_STEP1.equals(roleName))
        {
            roleGroup = collection.getWorkflowGroup(1);
            if (roleGroup == null)
                roleGroup = collection.createWorkflowGroup(1);

    }
    else if (ROLE_WF_STEP2.equals(roleName))
    {
            roleGroup = collection.getWorkflowGroup(2);
            if (roleGroup == null)
                roleGroup = collection.createWorkflowGroup(2);
        }
    else if (ROLE_WF_STEP3.equals(roleName))
    {
            roleGroup = collection.getWorkflowGroup(3);
            if (roleGroup == null)
                roleGroup = collection.createWorkflowGroup(3);

    }
        return roleGroup;
    }
   
    private static Group getXMLWorkflowRole(Context context, int collectionID, String roleName, Collection collection, Group roleGroup) throws IOException, WorkflowConfigurationException, SQLException, AuthorizeException {
        Role role = WorkflowUtils.getCollectionAndRepositoryRoles(collection).get(roleName);
        if(role.getScope() == Role.Scope.COLLECTION || role.getScope() == Role.Scope.REPOSITORY){
            roleGroup = WorkflowUtils.getRoleGroup(context, collectionID, role);
            if(roleGroup == null){
                AuthorizeManager.authorizeAction(context, collection, Constants.WRITE);
                roleGroup = Group.create(context);
                if(role.getScope() == Role.Scope.COLLECTION){
                    roleGroup.setName("COLLECTION_" + collection.getID() + "_WORKFLOW_ROLE_" + roleName);
                }else{
                    roleGroup.setName(role.getName());
                }
                roleGroup.update();
                AuthorizeManager.addPolicy(context, collection, Constants.ADD, roleGroup);
                if(role.getScope() == Role.Scope.COLLECTION){
                    WorkflowUtils.createCollectionWorkflowRole(context, collectionID, roleName, roleGroup);
                }
           }
        }
        return roleGroup;
    }

 
  /**
   * Delete one of collection's roles
   *
   * @param context The current DSpace context.
   * @param collectionID The collection id.
   * @param roleName ADMIN, WF_STEP1,  WF_STEP2, WF_STEP3,  SUBMIT, DEFAULT_READ.
   * @param groupID The id of the group associated with this role.
   * @return A process result's object.
   */
  public static FlowResult processDeleteCollectionRole(Context context, int collectionID, String roleName, int groupID) throws SQLException, UIException, IOException, AuthorizeException, WorkflowConfigurationException
    {
    FlowResult result = new FlowResult();
   
    Collection collection = Collection.find(context,collectionID);
    Group role = Group.find(context, groupID);
   
    // First, Unregister the role
    if (ROLE_ADMIN.equals(roleName))
    {
      collection.removeAdministrators();
    }
    else if (ROLE_SUBMIT.equals(roleName))
    {
      collection.removeSubmitters();
    }
        else{
            if(ConfigurationManager.getProperty("workflow", "workflow.framework").equals("xmlworkflow"))
            {
                WorkflowUtils.deleteRoleGroup(context, collection, roleName);
            }else{
                if (ROLE_WF_STEP1.equals(roleName))
                {
                    collection.setWorkflowGroup(1, null);
                }
                else if (ROLE_WF_STEP2.equals(roleName))
                {
                    collection.setWorkflowGroup(2, null);
                }
                else if (ROLE_WF_STEP3.equals(roleName))
                {
                    collection.setWorkflowGroup(3, null);
                }
            }
    }

    // Second, remove all authorizations for this role by searching for all policies that this
    // group has on the collection and remove them otherwise the delete will fail because
    // there are dependencies.
    @SuppressWarnings("unchecked") // the cast is correct
    List<ResourcePolicy> policies = AuthorizeManager.getPolicies(context,collection);
    for (ResourcePolicy policy : policies)
    {
      if (policy.getGroupID() == groupID)
            {
                policy.delete();
            }
    }
   
    // Finally, Delete the role's actual group.
    collection.update();
    role.delete();
    context.commit();
 
    result.setContinue(true);
    result.setOutcome(true);
    result.setMessage(new Message("default","The role was successfully deleted."));
    return result;
  }
 
 
  /**
   * Look up the id of a group authorized for one of the given roles. If no group is currently
   * authorized to perform this role then a new group will be created and assigned the role.
   *
   * @param context The current DSpace context.
   * @param collectionID The collection id.
   * @return The id of the group associated with that particular role or -1
   */
  public static int getCollectionDefaultRead(Context context, int collectionID) throws SQLException, AuthorizeException
  {
    Collection collection = Collection.find(context,collectionID);
   
    Group[] itemGroups = AuthorizeManager.getAuthorizedGroups(context, collection, Constants.DEFAULT_ITEM_READ);
    Group[] bitstreamGroups = AuthorizeManager.getAuthorizedGroups(context, collection, Constants.DEFAULT_BITSTREAM_READ);
   
       int itemGroupID = -1;
       
    // If there are more than one groups assigned either of these privileges then this role based method will not work.
        // The user will need to go to the authorization section to manually straighten this out.   
    if (itemGroups.length != 1 || bitstreamGroups.length != 1)
    {
        // do nothing the itemGroupID is already set to -1
    }
    else
    {
          Group itemGroup = itemGroups[0];
          Group bitstreamGroup = bitstreamGroups[0];
         
            // If the same group is not assigned both of these privileges then this role based method will not work. The user
            // will need to go to the authorization section to manually straighten this out.
          if (itemGroup.getID() != bitstreamGroup.getID())
          {
              // do nothing the itemGroupID is already set to -1
          }
          else
          {
              itemGroupID = itemGroup.getID();
          }
    }

    return itemGroupID;
  }
 
  /**
   * Change default privileges from the anonymous group to a new group that will be created and
   * appropriate privileges assigned. The id of this new group will be returned.
   *
   * @param context The current DSpace context.
   * @param collectionID The collection id.
   * @return The group ID of the new group.
   */
  public static int createCollectionDefaultReadGroup(Context context, int collectionID) throws SQLException, AuthorizeException, UIException
  {
    int roleID = getCollectionDefaultRead(context, collectionID);
   
    if (roleID != 0)
        {
            throw new UIException("Unable to create a new default read group because either the group already exists or multiple groups are assigned the default privileges.");
        }
   
    Collection collection = Collection.find(context,collectionID);
    Group role = Group.create(context);
    role.setName("COLLECTION_"+collection.getID() +"_DEFAULT_READ");
   
    // Remove existing privileges from the anonymous group.
    AuthorizeManager.removePoliciesActionFilter(context, collection, Constants.DEFAULT_ITEM_READ);
    AuthorizeManager.removePoliciesActionFilter(context, collection, Constants.DEFAULT_BITSTREAM_READ);
   
    // Grant our new role the default privileges.
    AuthorizeManager.addPolicy(context, collection, Constants.DEFAULT_ITEM_READ,      role);
    AuthorizeManager.addPolicy(context, collection, Constants.DEFAULT_BITSTREAM_READ, role);
   
    // Commit the changes
    role.update();
    context.commit();
   
    return role.getID();
  }
 
  /**
   * Change the default read privileges to the anonymous group.
   *
   * If getCollectionDefaultRead() returns -1 or the anonymous group then nothing
   * is done.
   *
   * @param context The current DSpace context.
   * @param collectionID The collection id.
   * @return A process result's object.
   */
  public static FlowResult changeCollectionDefaultReadToAnonymous(Context context, int collectionID) throws SQLException, AuthorizeException, UIException
  {
    FlowResult result = new FlowResult();
   
    int roleID = getCollectionDefaultRead(context, collectionID);
   
    if (roleID < 1)
    {
      throw new UIException("Unable to delete the default read role because the role is either already assigned to the anonymous group or multiple groups are assigned the default privileges.");
    }
   
    Collection collection = Collection.find(context,collectionID);
    Group role = Group.find(context, roleID);
    Group anonymous = Group.find(context,0);
   
    // Delete the old role, this will remove the default privileges.
    role.delete();
   
    // Set anonymous as the default read group.
    AuthorizeManager.addPolicy(context, collection, Constants.DEFAULT_ITEM_READ,      anonymous);
    AuthorizeManager.addPolicy(context, collection, Constants.DEFAULT_BITSTREAM_READ, anonymous);
   
    // Commit the changes
    context.commit();
   
    result.setContinue(true);
    result.setOutcome(true);
    result.setMessage(new Message("default","All new items submitted to this collection will default to anonymous read."));
    return result;
  }
 
  /**
   * Delete collection itself
   *
   * @param context The current DSpace context.
   * @param collectionID The collection id.
   * @return A process result's object.
   */
  public static FlowResult processDeleteCollection(Context context, int collectionID) throws SQLException, AuthorizeException, IOException
  {
    FlowResult result = new FlowResult();
   
    Collection collection = Collection.find(context, collectionID);
   
    Community[] parents = collection.getCommunities();
   
    for (Community parent: parents)
    {
      parent.removeCollection(collection);
      parent.update();
    }
   
    context.commit();
   
    result.setContinue(true);
    result.setOutcome(true);
    result.setMessage(new Message("default","The collection was successfully deleted."));
   
    return result;
  }
 
 
  /**
   * Create a new collection
   *
   * @param context The current DSpace context.
   * @param communityID The id of the parent community.
   * @return A process result's object.
   */
  public static FlowResult processCreateCollection(Context context, int communityID, Request request) throws SQLException, AuthorizeException, IOException
  {
    FlowResult result = new FlowResult();
   
    Community parent = Community.find(context, communityID);
    Collection newCollection = parent.createCollection();
   
    // Get the metadata
    String name = request.getParameter("name");
    String shortDescription = request.getParameter("short_description");
    String introductoryText = request.getParameter("introductory_text");
    String copyrightText = request.getParameter("copyright_text");
    String sideBarText = request.getParameter("side_bar_text");
    String license = request.getParameter("license");
    String provenanceDescription = request.getParameter("provenance_description");
   
    // If they don't have a name then make it untitled.
    if (name == null || name.length() == 0)
        {
            name = "Untitled";
        }

    // If empty, make it null.
    if (shortDescription != null && shortDescription.length() == 0)
        {
            shortDescription = null;
        }
    if (introductoryText != null && introductoryText.length() == 0)
        {
            introductoryText = null;
        }
    if (copyrightText != null && copyrightText.length() == 0)
        {
            copyrightText = null;
        }
    if (sideBarText != null && sideBarText.length() == 0)
        {
            sideBarText = null;
        }
    if (license != null && license.length() == 0)
        {
            license = null;
        }
    if (provenanceDescription != null && provenanceDescription.length() == 0)
        {
            provenanceDescription = null;
        }
   
    // Save the metadata
    newCollection.setMetadata("name", name);
    newCollection.setMetadata("short_description", shortDescription);
    newCollection.setMetadata("introductory_text", introductoryText);
    newCollection.setMetadata("copyright_text", copyrightText);
    newCollection.setMetadata("side_bar_text", sideBarText);
    newCollection.setMetadata("license", license);
    newCollection.setMetadata("provenance_description", provenanceDescription);
   
       
        // Set the logo
      Object object = request.get("logo");
      Part filePart = null;
    if (object instanceof Part)
        {
            filePart = (Part) object;
        }

    if (filePart != null && filePart.getSize() > 0)
    {
      InputStream is = filePart.getInputStream();
     
      newCollection.setLogo(is);
    }
       
        // Save everything
    newCollection.update();
        context.commit();
        // success
        result.setContinue(true);
        result.setOutcome(true);
        result.setMessage(new Message("default","The collection was successfully created."));
        result.setParameter("collectionID", newCollection.getID());
   
    return result;
  }
 
   
 
 
 
  // Community related functions

  /**
   * Create a new community
   *
   * @param context The current DSpace context.
   * @param communityID The id of the parent community (-1 for a top-level community).
   * @return A process result's object.
   */
  public static FlowResult processCreateCommunity(Context context, int communityID, Request request) throws AuthorizeException, IOException, SQLException
  {
    FlowResult result = new FlowResult();

    Community parent = Community.find(context, communityID);
    Community newCommunity;
   
    if (parent != null)
        {
            newCommunity = parent.createSubcommunity();
        }
    else
        {
            newCommunity = Community.create(null, context);
        }
   
    String name = request.getParameter("name");
    String shortDescription = request.getParameter("short_description");
    String introductoryText = request.getParameter("introductory_text");
    String copyrightText = request.getParameter("copyright_text");
    String sideBarText = request.getParameter("side_bar_text");

    // If they don't have a name then make it untitled.
    if (name == null || name.length() == 0)
        {
            name = "Untitled";
        }

    // If empty, make it null.
    if (shortDescription != null && shortDescription.length() == 0)
        {
            shortDescription = null;
        }
    if (introductoryText != null && introductoryText.length() == 0)
        {
            introductoryText = null;
        }
    if (copyrightText != null && copyrightText.length() == 0)
        {
            copyrightText = null;
        }
    if (sideBarText != null && sideBarText.length() == 0)
        {
            sideBarText = null;
        }
   
    newCommunity.setMetadata("name", name);
    newCommunity.setMetadata("short_description", shortDescription);
    newCommunity.setMetadata("introductory_text", introductoryText);
    newCommunity.setMetadata("copyright_text", copyrightText);
    newCommunity.setMetadata("side_bar_text", sideBarText);
       
      // Upload the logo
    Object object = request.get("logo");
    Part filePart = null;
    if (object instanceof Part)
        {
            filePart = (Part) object;
        }

    if (filePart != null && filePart.getSize() > 0)
    {
      InputStream is = filePart.getInputStream();
     
      newCommunity.setLogo(is);
    }
       
    // Save everything
    newCommunity.update();
        context.commit();
        // success
        result.setContinue(true);
        result.setOutcome(true);
        result.setMessage(new Message("default","The community was successfully created."));
        result.setParameter("communityID", newCommunity.getID());
   
    return result;
  }
 
 
  /**
   * Process the community metadata edit form.
   *
   * @param context The current DSpace context.
   * @param communityID The community id.
   * @param deleteLogo Determines if the logo should be deleted along with the metadata editing action.
   * @param request the Cocoon request object
   * @return A process result's object.
   */
  public static FlowResult processEditCommunity(Context context, int communityID, boolean deleteLogo, Request request) throws AuthorizeException, IOException, SQLException
  {
    FlowResult result = new FlowResult();

    Community community = Community.find(context, communityID);
   
    String name = request.getParameter("name");
    String shortDescription = request.getParameter("short_description");
    String introductoryText = request.getParameter("introductory_text");
    String copyrightText = request.getParameter("copyright_text");
    String sideBarText = request.getParameter("side_bar_text");

    // If they don't have a name then make it untitled.
    if (name == null || name.length() == 0)
        {
            name = "Untitled";
        }

    // If empty, make it null.
    if (shortDescription != null && shortDescription.length() == 0)
        {
            shortDescription = null;
        }
    if (introductoryText != null && introductoryText.length() == 0)
        {
            introductoryText = null;
        }
    if (copyrightText != null && copyrightText.length() == 0)
        {
            copyrightText = null;
        }
    if (sideBarText != null && sideBarText.length() == 0)
        {
            sideBarText = null;
        }
   
    // Save the data
    community.setMetadata("name", name);
    community.setMetadata("short_description", shortDescription);
        community.setMetadata("introductory_text", introductoryText);
        community.setMetadata("copyright_text", copyrightText);
        community.setMetadata("side_bar_text", sideBarText);
       
        if (deleteLogo)
        {
          // Remove the logo
          community.setLogo(null);
        }
        else
        {
          // Update the logo
        Object object = request.get("logo");
        Part filePart = null;
        if (object instanceof Part)
            {
                filePart = (Part) object;
            }

        if (filePart != null && filePart.getSize() > 0)
        {
          InputStream is = filePart.getInputStream();
         
          community.setLogo(is);
        }
        }
       
        // Save everything
        community.update();
        context.commit();
       
        // No notice...
        result.setContinue(true);
    return result;
  }
 
 
 
  /**
   * Delete community itself
   *
   * @param context The current DSpace context.
   * @param communityID The community id.
   * @return A process result's object.
   */
  public static FlowResult processDeleteCommunity(Context context, int communityID) throws SQLException, AuthorizeException, IOException
  {
    FlowResult result = new FlowResult();
   
    Community community = Community.find(context, communityID);
   
    community.delete();
    context.commit();
   
    result.setContinue(true);
    result.setOutcome(true);
    result.setMessage(new Message("default","The community was successfully deleted."));
   
    return result;
  }
 
  /**
     * Look up the id of a group authorized for one of the given roles. If no group is currently
     * authorized to perform this role then a new group will be created and assigned the role.
     *
     * @param context The current DSpace context.
     * @param communityID The collection id.
     * @param roleName ADMIN.
     * @return The id of the group associated with that particular role, or -1 if the role was not found.
     */
    public static int getCommunityRole(Context context, int communityID, String roleName) throws SQLException, AuthorizeException, IOException
    {
        Community community = Community.find(context, communityID);
 
        // Determine the group based upon which role we are looking for.
        Group role = null;
        if (ROLE_ADMIN.equals(roleName))
        {
            role = community.getAdministrators();
            if (role == null)
            {
                role = community.createAdministrators();
            }
        }
 
        // In case we needed to create a group, save our changes
        community.update();
        context.commit();
       
        // If the role name was valid then role should be non null,
        if (role != null)
        {
            return role.getID();
        }
       
        return -1;
    }

  /**
     * Delete one of a community's roles
     *
     * @param context The current DSpace context.
     * @param communityID The community id.
     * @param roleName ADMIN.
     * @param groupID The id of the group associated with this role.
     * @return A process result's object.
     */
    public static FlowResult processDeleteCommunityRole(Context context, int communityID, String roleName, int groupID) throws SQLException, UIException, IOException, AuthorizeException
    {
        FlowResult result = new FlowResult();
       
        Community community = Community.find(context, communityID);
        Group role = Group.find(context, groupID);
       
        // First, unregister the role
        if (ROLE_ADMIN.equals(roleName))
        {
            community.removeAdministrators();
        }
       
        // Second, remove all authorizations for this role by searching for all policies that this
        // group has on the collection and remove them otherwise the delete will fail because
        // there are dependencies.
        @SuppressWarnings("unchecked") // the cast is correct
        List<ResourcePolicy> policies = AuthorizeManager.getPolicies(context, community);
        for (ResourcePolicy policy : policies)
        {
            if (policy.getGroupID() == groupID)
            {
                policy.delete();
            }
        }
       
        // Finally, delete the role's actual group.
        community.update();
        role.delete();
        context.commit();
   
        result.setContinue(true);
        result.setOutcome(true);
        result.setMessage(new Message("default","The role was successfully deleted."));
        return result;
    }
   
    /**
     * Delete a collection's template item (which is not a member of the collection).
     *
     * @param context
     * @param collectionID
     * @throws SQLException
     * @throws AuthorizeException
     * @throws IOException
     */
    public static FlowResult processDeleteTemplateItem(Context context, int collectionID) throws SQLException, AuthorizeException, IOException
    {
        FlowResult result = new FlowResult();
       
        Collection collection = Collection.find(context, collectionID);
       
        collection.removeTemplateItem();
        context.commit();
       
        result.setContinue(true);
        result.setOutcome(true);
        return result;
    }
 
   
        /**
     * processCurateCollection
     *
     * Utility method to process curation tasks
     * submitted via the DSpace GUI
     *
     * @param context
     * @param dsoID
     * @param request
     *
     */
        public static FlowResult processCurateCollection(Context context, int dsoID, Request request)
                                                                throws AuthorizeException, IOException, SQLException, Exception
  {
                String task = request.getParameter("curate_task");
                Curator curator = FlowCurationUtils.getCurator(task);
              
                try
                {
                    Collection collection = Collection.find(context, dsoID);
                    if (collection != null)
                    {
                        //Call curate(context,ID) to ensure a Task Performer (Eperson) is set in Curator
                        curator.curate(context, collection.getHandle());
                      
                    }
                    return FlowCurationUtils.getRunFlowResult(task, curator, true);
                }
    catch (Exception e)
                {
                    curator.setResult(task, e.getMessage());
                    return FlowCurationUtils.getRunFlowResult(task, curator, false);
    }
               
  }

        /**
         * queues curation tasks
         */
        public static FlowResult processQueueCollection(Context context, int dsoID, Request request)
                                                                throws AuthorizeException, IOException, SQLException, Exception
  {
                String task = request.getParameter("curate_task");
                Curator curator = FlowCurationUtils.getCurator(task);
                String objId = String.valueOf(dsoID);
                String taskQueueName = ConfigurationManager.getProperty("curate", "ui.queuename");
                boolean status = false;
                Collection collection = Collection.find(context, dsoID);
                if (collection != null)
                {
                    objId = collection.getHandle();
                    try
                    {
                        curator.queue(context, objId, taskQueueName);
                        status = true;
                    }
                    catch (IOException ioe)
                    {
                        // no-op
                    }
                }
                return FlowCurationUtils.getQueueFlowResult(task, status, objId, taskQueueName);
  }

    /**
     * processCurateCommunity
     *
     * Utility method to process curation tasks
     * submitted via the DSpace GUI
     *
     * @param context
     * @param dsoID
     * @param request
     *
     */
        public static FlowResult processCurateCommunity(Context context, int dsoID, Request request)
                                                                throws AuthorizeException, IOException, SQLException, Exception
  {
                String task = request.getParameter("curate_task");
    Curator curator = FlowCurationUtils.getCurator(task);
                try
                {
                    Community community = Community.find(context, dsoID);
                    if (community != null)
                    {
                        //Call curate(context,ID) to ensure a Task Performer (Eperson) is set in Curator
                        curator.curate(context, community.getHandle());
                    }
                    return FlowCurationUtils.getRunFlowResult(task, curator, true);
                }
                catch (Exception e)
                {
                    curator.setResult(task, e.getMessage());
                    return FlowCurationUtils.getRunFlowResult(task, curator, false);
    }
  }

        /**
         * queues curation tasks
         */
        public static FlowResult processQueueCommunity(Context context, int dsoID, Request request)
                                                                throws AuthorizeException, IOException, SQLException, Exception
  {
                String task = request.getParameter("curate_task");
                Curator curator = FlowCurationUtils.getCurator(task);
                String objId = String.valueOf(dsoID);
                String taskQueueName = ConfigurationManager.getProperty("curate", "ui.queuename");
                boolean status = false;
                Community community = Community.find(context, dsoID);
                if (community != null)
                {
                    objId = community.getHandle();
                    try
                    {
                        curator.queue(context, objId, taskQueueName);
                        status = true;
                    }
                    catch (IOException ioe)
                    {
                        // no-op
                    }
                }
                return FlowCurationUtils.getQueueFlowResult(task, status, objId, taskQueueName);
  }
 
   
  /**
   * Check whether this metadata value is a proper XML fragment. If the value is not
   * then an error message will be returned that might (sometimes not) tell the user how
   * to correct the problem.
   *
   * @param value The metadata value
   * @return An error string of the problem or null if there is no problem with the metadata value.
   */
  public static String checkXMLFragment(String value)
  {
    // escape the ampersand correctly;
    value = escapeXMLEntities(value);
   
    // Try and parse the XML into a mini-DOM
      String xml = "<?xml version='1.0' encoding='UTF-8'?><fragment>"+value+"</fragment>";
     
        ByteArrayInputStream inputStream = null;
        try {
            inputStream = new ByteArrayInputStream(xml.getBytes("UTF-8"));
        } catch (UnsupportedEncodingException e) {
            inputStream = new ByteArrayInputStream(xml.getBytes()); //not supposed to happen, but never hurts

        }
     
       SAXBuilder builder = new SAXBuilder();
    try
    {
      // This will generate an error if not valid XML.
      builder.build(inputStream);
    }
    catch (JDOMException jdome)
    {
      // It's not XML
      return jdome.getMessage();
    }
    catch (IOException ioe)
    {
      // This shouldn't ever occur because we are parsing
      // an in-memory string, but in case it does we'll just return
      // it as a normal error.
      return ioe.getMessage();
    }

      return null;
  }
 
    /**
     * Sanitize any XML that was inputed by the user, this will clean up
     * any unescaped characters so that they can be stored as proper XML.
     * These are errors that in general we want to take care of on behalf
     * of the user.
     *
     * @param value The unsanitized value
     * @return A sanitized value
     */
  public static String escapeXMLEntities(String value)
  {
    if (value == null)
        {
            return null;
        }
   
    // Escape any XML entities
      int amp = -1;
      while ((amp = value.indexOf('&', amp+1)) > -1)
      {
        // Is it an xml entity named by number?
        if (substringCompare(value,amp+1,'#'))
            {
                continue;
            }
       
        // &amp;
        if (substringCompare(value,amp+1,'a','m','p',';'))
            {
                continue;
            }
       
        // &apos;
        if (substringCompare(value,amp+1,'a','p','o','s',';'))
            {
                continue;
            }
       
        // &quot;
        if (substringCompare(value,amp+1,'q','u','o','t',';'))
            {
                continue;
            }
         
        // &lt;
        if (substringCompare(value,amp+1,'l','t',';'))
            {
                continue;
            }
       
        // &gt;
        if (substringCompare(value,amp+1,'g','t',';'))
            {
                continue;
            }
       
        // Replace the ampersand with an XML entity.
        value = value.substring(0,amp) + "&amp;" + value.substring(amp+1);
      }
     
      return value;
  }
 
   /**
     * Check if the given character sequence is located in the given
     * string at the specified index. If it is then return true, otherwise false.
     *
     * @param string The string to test against
     * @param index The location within the string
     * @param characters The character sequence to look for.
     * @return true if the character sequence was found, otherwise false.
     */
    private static boolean substringCompare(String string, int index, char ... characters)
    {
      // Is the string long enough?
      if (string.length() <= index + characters.length)
        {
            return false;
        }
     
      // Do all the characters match?
      for (char character : characters)
      {
        if (string.charAt(index) != character)
            {
                return false;
            }
        index++;
      }
     
      return false;
    }
 

}
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