Package inspector.jqcml.io.xml

Source Code of inspector.jqcml.io.xml.QcMLReaderTest

package inspector.jqcml.io.xml;

import static org.junit.Assert.*;

import inspector.jqcml.io.xml.QcMLFileReader;
import inspector.jqcml.model.Cv;
import inspector.jqcml.model.QcML;
import inspector.jqcml.model.QualityAssessment;

import java.io.StringWriter;
import java.util.Iterator;
import java.util.Vector;

import org.apache.log4j.Appender;
import org.apache.log4j.ConsoleAppender;
import org.apache.log4j.PatternLayout;
import org.apache.log4j.WriterAppender;
import org.junit.Before;
import org.junit.BeforeClass;
import org.junit.Test;

public class QcMLReaderTest {
   
  private QcMLFileReader reader;

    @Before
    public void setUp() {
        reader = new QcMLFileReader();
  }

    @Test(expected=NullPointerException.class)
    public void validate_null() {
        reader.validate(null);
    }

    @Test(expected=IllegalArgumentException.class)
    public void validate_nonExistingFile() {
        reader.validate("/NonExisting.qcML");
    }

    @Test
    public void validate_noXMLFile() {
        assertFalse(reader.validate(getClass().getResource("/PlainText.qcML").getFile()));
    }

    @Test
    public void validate_invalidXMLFile() {
        assertFalse(reader.validate(getClass().getResource("/Invalid.qcML").getFile()));
    }

    @Test
    public void validate_validQcMLFile() {
        assertTrue(reader.validate(getClass().getResource("/CvParameterTest.qcML").getFile()));
    }

    @Test(expected=NullPointerException.class)
    public void getQcML_null() {
        reader.getQcML(null);
    }

    @Test(expected=IllegalArgumentException.class)
    public void getQcML_nonExistingFile() {
        reader.getQcML("/NonExisting.qcML");
    }

    @Test
    public void getQcML_noXMLFile() {
        assertNull(reader.getQcML(getClass().getResource("/PlainText.qcML").getFile()));
    }

    @Test
    public void getQcML_invalidXMLFile() {
        assertNull(reader.getQcML(getClass().getResource("/Invalid.qcML").getFile()));
    }

  @Test
  public void getQcML_invalidVersionFormat() {
    // warning should be logged
    assertNull(reader.getQcML(getClass().getResource("/InvalidVersionFormat.qcML").getFile()));
  }

  @Test
  public void getQcML_invalidVersionNumber() {
    // warning should be logged
    QcML qcml = reader.getQcML(getClass().getResource("/InvalidVersionNumber.qcML").getFile());

    assertNotNull(qcml);

    assertEquals(QcMLFileReader.QCML_VERSION, qcml.getVersion());
  }

    @Test(expected=NullPointerException.class)
    public void getCv_nullFile() {
        reader.getCv(null, "id");
    }

    @Test(expected=IllegalArgumentException.class)
    public void getCv_nonExistingFile() {
        reader.getCv("/NonExisting.qcML", "id");
    }

    @Test
    public void getCv_noXMLFile() {
        assertNull(reader.getCv(getClass().getResource("/PlainText.qcML").getFile(), "id"));
    }

    @Test
    public void getCv_invalidXMLFile() {
        assertNull(reader.getCv(getClass().getResource("/Invalid.qcML").getFile(), "id"));
    }

    @Test
    public void getCv_nullId() {
        assertNull(reader.getCv(getClass().getResource("/CvParameterTest.qcML").getFile(), null));
    }

    @Test
    public void getCv_nonExistingId() {
        assertNull(reader.getCv(getClass().getResource("/CvParameterTest.qcML").getFile(), "non-existing id"));
    }

    @Test
    public void getCv_valid() {
        assertNotNull(reader.getCv(getClass().getResource("/CvParameterTest.qcML").getFile(), "cv_0"));
        assertNotNull(reader.getCv(getClass().getResource("/CvParameterTest.qcML").getFile(), "cv_1"));
    }

    @Test(expected=NullPointerException.class)
    public void getCvIterator_nullFile() {
        reader.getCvIterator(null);
    }

    @Test(expected=IllegalArgumentException.class)
    public void getCvIterator_nonExistingFile() {
        reader.getCvIterator("/NonExisting.qcML");
    }

    @Test
    public void getCvIterator_noXMLFile() {
        Iterator<Cv> it = reader.getCvIterator(getClass().getResource("/PlainText.qcML").getFile());

        assertFalse(it.hasNext());
    }

    @Test
    public void getCvIterator_invalidXMLFile() {
        Iterator<Cv> it = reader.getCvIterator(getClass().getResource("/Invalid.qcML").getFile());

        assertFalse(it.hasNext());
    }

    @Test
    public void getCvIterator_valid() {
        Iterator<Cv> it = reader.getCvIterator(getClass().getResource("/CvParameterTest.qcML").getFile());

        for(int i = 0; i < 2; i++) {
            assertTrue(it.hasNext());
            it.next();
        }
        assertFalse(it.hasNext());
    }

    @Test(expected=NullPointerException.class)
    public void getQualityAssessment_nullFile() {
        reader.getQualityAssessment(null, "id");
    }

    @Test(expected=IllegalArgumentException.class)
    public void getQualityAssessment_nonExistingFile() {
        reader.getQualityAssessment("/NonExisting.qcML", "id");
    }

    @Test
    public void getQualityAssessment_noXMLFile() {
        assertNull(reader.getQualityAssessment(getClass().getResource("/PlainText.qcML").getFile(), "id"));
    }

    @Test
    public void getQualityAssessment_invalidXMLFile() {
        assertNull(reader.getQualityAssessment(getClass().getResource("/Invalid.qcML").getFile(), "id"));
    }

    @Test
    public void getQualityAssessment_nullId() {
        assertNull(reader.getQualityAssessment(getClass().getResource("/CvParameterTest.qcML").getFile(), null));
    }

    @Test
    public void getQualityAssessment_nonExistingId() {
        assertNull(reader.getQualityAssessment(getClass().getResource("/CvParameterTest.qcML").getFile(), "non-existing id"));
    }

    @Test
    public void getQualityAssessment_valid() {
        assertNotNull(reader.getQualityAssessment(getClass().getResource("/CvParameterTest.qcML").getFile(), "run_1"));
        assertNotNull(reader.getQualityAssessment(getClass().getResource("/CvParameterTest.qcML").getFile(), "run_2"));
        assertNotNull(reader.getQualityAssessment(getClass().getResource("/CvParameterTest.qcML").getFile(), "set_1"));
    }

    @Test(expected=NullPointerException.class)
    public void getQualityAssessmentIterator_nullFile() {
        reader.getQualityAssessmentIterator(null);
    }

    @Test(expected=IllegalArgumentException.class)
    public void getQualityAssessmentIterator_nonExistingFile() {
        reader.getQualityAssessmentIterator("/NonExisting.qcML");
    }

    @Test
    public void getQualityAssessmentIterator_noXMLFile() {
        Iterator<QualityAssessment> it = reader.getQualityAssessmentIterator(getClass().getResource("/PlainText.qcML").getFile());

        assertFalse(it.hasNext());
    }

    @Test
    public void getQualityAssessmentIterator_invalidXMLFile() {
        Iterator<QualityAssessment> it = reader.getQualityAssessmentIterator(getClass().getResource("/Invalid.qcML").getFile());

        assertFalse(it.hasNext());
    }

    @Test
    public void getQualityAssessmentIterator_valid() {
        Iterator<QualityAssessment> it = reader.getQualityAssessmentIterator(getClass().getResource("/CvParameterTest.qcML").getFile());

        for(int i = 0; i < 3; i++) {
            assertTrue(it.hasNext());
            it.next();
        }
        assertFalse(it.hasNext());
    }

}
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