/*
* Copyright 2006-2012 The MZmine 2 Development Team
*
* This file is part of MZmine 2.
*
* MZmine 2 is free software; you can redistribute it and/or modify it under the
* terms of the GNU General Public License as published by the Free Software
* Foundation; either version 2 of the License, or (at your option) any later
* version.
*
* MZmine 2 is distributed in the hope that it will be useful, but WITHOUT ANY
* WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
* A PARTICULAR PURPOSE. See the GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License along with
* MZmine 2; if not, write to the Free Software Foundation, Inc., 51 Franklin St,
* Fifth Floor, Boston, MA 02110-1301 USA
*/
package net.sf.mzmine.util.components;
import java.awt.Color;
import java.text.NumberFormat;
import java.util.Vector;
import javax.swing.table.AbstractTableModel;
import net.sf.mzmine.data.ChromatographicPeak;
import net.sf.mzmine.main.MZmineCore;
public class PeakSummaryTableModel extends AbstractTableModel {
private static NumberFormat mzFormat = MZmineCore.getConfiguration()
.getMZFormat();
private static NumberFormat rtFormat = MZmineCore.getConfiguration()
.getRTFormat();
private static NumberFormat intensityFormat = MZmineCore.getConfiguration()
.getIntensityFormat();
private Vector<ChromatographicPeak> peaks = new Vector<ChromatographicPeak>();
private Vector<Color> peakColors = new Vector<Color>();
private static String[] columnNames = {"File Name", "Mass", "RT", "Height",
"Area"};
public String getColumnName(int col) {
return columnNames[col].toString();
}
public int getRowCount() {
return peaks.size();
}
public int getColumnCount() {
return columnNames.length;
}
public Object getValueAt(int row, int col) {
Object value = null;
ChromatographicPeak peak = peaks.get(row);
switch (col) {
case (0) :
value = peak.getDataFile().getName();
break;
case (1) :
value = mzFormat.format(peak.getMZ());
break;
case (2) :
value = rtFormat.format(peak.getRT());
break;
case (3) :
value = intensityFormat.format(peak.getHeight());
break;
case (4) :
value = intensityFormat.format(peak.getArea());
break;
}
return value;
}
public ChromatographicPeak getElementAt(int row) {
return peaks.get(row);
}
public boolean isCellEditable(int row, int col) {
return false;
}
public Color getPeakColor(int row) {
return peakColors.get(row);
}
public void addElement(ChromatographicPeak peak, Color peakColor) {
peaks.add(peak);
peakColors.add(peakColor);
fireTableRowsInserted(0, peaks.size() - 1);
}
public void setValueAt(Object value, int row, int col) {
}
public int getIndexRow(String fileName) {
String localFileName;
int index = -1;
for (int i = 0; i < peaks.size(); i++) {
localFileName = peaks.get(i).getDataFile().getName();
if (localFileName.equals(fileName)) {
index = i;
}
}
return index;
}
}