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*
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
* regarding copyright ownership. The ASF licenses this file
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of4 the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing,
* software distributed under the License is distributed on an
* "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
* KIND, either express or implied. See the License for the
* specific language governing permissions and limitations
* under the License.
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*/
package org.apache.airavata.test.suite.gfac;
import static org.junit.Assert.fail;
import java.net.URL;
import java.util.ArrayList;
import java.util.HashMap;
import java.util.List;
import java.util.Map;
import java.util.Properties;
import org.apache.airavata.client.AiravataAPIFactory;
import org.apache.airavata.client.api.AiravataAPI;
import org.apache.airavata.commons.gfac.type.ActualParameter;
import org.apache.airavata.commons.gfac.type.ApplicationDescription;
import org.apache.airavata.commons.gfac.type.HostDescription;
import org.apache.airavata.commons.gfac.type.ServiceDescription;
import org.apache.airavata.core.gfac.context.invocation.impl.DefaultExecutionContext;
import org.apache.airavata.core.gfac.context.invocation.impl.DefaultInvocationContext;
import org.apache.airavata.core.gfac.context.message.impl.ParameterContextImpl;
import org.apache.airavata.core.gfac.context.security.impl.GSISecurityContext;
import org.apache.airavata.core.gfac.notification.impl.LoggingNotification;
import org.apache.airavata.core.gfac.services.impl.PropertiesBasedServiceImpl;
import org.apache.airavata.schemas.gfac.ApplicationDeploymentDescriptionType;
import org.apache.airavata.schemas.gfac.DataType;
import org.apache.airavata.schemas.gfac.GlobusHostType;
import org.apache.airavata.schemas.gfac.HpcApplicationDeploymentType;
import org.apache.airavata.schemas.gfac.InputParameterType;
import org.apache.airavata.schemas.gfac.OutputParameterType;
import org.apache.airavata.schemas.gfac.ParameterType;
import org.apache.airavata.schemas.gfac.ProjectAccountType;
import org.apache.airavata.schemas.gfac.QueueType;
import org.apache.airavata.schemas.gfac.URIParameterType;
import org.junit.Assert;
import org.junit.Before;
import org.junit.Test;
public class FileBreedGramTest {
public static final String MYPROXY = "myproxy";
public static final String GRAM_PROPERTIES = "gram.properties";
private AiravataAPI airavataAPI = null;
@Before
public void setUp() throws Exception {
/*
* Create database
*/
Map<String,String> config = new HashMap<String,String>();
airavataAPI=AiravataAPIFactory.getAPI("default","admin");
// jcrRegistry = AiravataRegistryFactory.getRegistry(new Gateway("default"), new AiravataUser("admin"));
config.put("org.apache.jackrabbit.repository.home","target");
/*
* Host Description Document
*/
URL url = this.getClass().getClassLoader().getResource(GRAM_PROPERTIES);
Properties properties = new Properties();
properties.load(url.openStream());
HostDescription host = new HostDescription();
host.getType().changeType(GlobusHostType.type);
host.getType().setHostName(properties.getProperty("gram.name"));
host.getType().setHostAddress(properties.getProperty("gram.host"));
((GlobusHostType) host.getType()).setGridFTPEndPointArray(new String[]{properties.getProperty("gridftp.endpoint")});
((GlobusHostType) host.getType()).setGlobusGateKeeperEndPointArray(new String[]{properties.getProperty("gram.endpoints")});
/*
* Application deployment description
*/
ApplicationDescription appDesc = new ApplicationDescription(HpcApplicationDeploymentType.type);
HpcApplicationDeploymentType app = (HpcApplicationDeploymentType) appDesc.getType();
app.setCpuCount(1);
app.setNodeCount(1);
ApplicationDeploymentDescriptionType.ApplicationName name = appDesc.getType().addNewApplicationName();
name.setStringValue("FileBreed");
app.setExecutableLocation("/bin/echo");
app.setScratchWorkingDirectory(properties.getProperty("scratch.working.directory"));
app.setCpuCount(1);
ProjectAccountType projectAccountType = ((HpcApplicationDeploymentType) appDesc.getType()).addNewProjectAccount();
projectAccountType.setProjectAccountNumber(properties.getProperty("allocation.charge.number"));
QueueType queueType = app.addNewQueue();
queueType.setQueueName(properties.getProperty("defualt.queue"));
/*
* Application Service
*/
ServiceDescription serv = new ServiceDescription();
serv.getType().setName("FileBreedTest");
InputParameterType inputParameter = InputParameterType.Factory.newInstance();
inputParameter.setParameterName("Input_File");
inputParameter.setParameterDescription("File to Replicate");
ParameterType parameterType1 = inputParameter.addNewParameterType();
parameterType1.setType(DataType.Enum.forString("URI"));
inputParameter.setParameterType(URIParameterType.Factory.newInstance());
List<InputParameterType> inputList = new ArrayList<InputParameterType>();
inputList.add(inputParameter);
InputParameterType[] inputParamList = inputList.toArray(new InputParameterType[inputList
.size()]);
OutputParameterType outputParameter = OutputParameterType.Factory.newInstance();
ParameterType outputParameterType = outputParameter.addNewParameterType();
outputParameterType.setName("replicated_file");
outputParameterType.setType(DataType.URI);
List<OutputParameterType> outputList = new ArrayList<OutputParameterType>();
outputList.add(outputParameter);
OutputParameterType[] outputParamList = outputList
.toArray(new OutputParameterType[outputList.size()]);
serv.getType().setInputParametersArray(inputParamList);
serv.getType().setOutputParametersArray(outputParamList);
/*
* Save deployment descriptions to registry
*/
airavataAPI.getApplicationManager().saveHostDescription(host);
airavataAPI.getApplicationManager().saveApplicationDescription(serv.getType().getName(), host.getType().getHostName(), appDesc);
airavataAPI.getApplicationManager().saveServiceDescription(serv);
// jcrRegistry.deployServiceOnHost(serv.getType().getName(), host.getType().getHostName());
}
@Test
public void testExecute() {
try {
URL url = this.getClass().getClassLoader().getResource(GRAM_PROPERTIES);
Properties properties = new Properties();
properties.load(url.openStream());
DefaultInvocationContext ct = new DefaultInvocationContext();
DefaultExecutionContext ec = new DefaultExecutionContext();
ec.addNotifiable(new LoggingNotification());
ec.setRegistryService(airavataAPI);
ct.setExecutionContext(ec);
GSISecurityContext gsiSecurityContext = new GSISecurityContext();
gsiSecurityContext.setMyproxyServer(properties.getProperty("myproxy.server"));
gsiSecurityContext.setMyproxyUserName(properties.getProperty("myproxy.username"));
gsiSecurityContext.setMyproxyPasswd(properties.getProperty("myproxy.password"));
gsiSecurityContext.setMyproxyLifetime(14400);
gsiSecurityContext.setTrustedCertLoc(properties.getProperty("certificate.path"));
ct.addSecurityContext(MYPROXY, gsiSecurityContext);
ct.setServiceName("FileBreedTest");
/*
* Input
*/
ParameterContextImpl input = new ParameterContextImpl();
ActualParameter input_file = new ActualParameter();
// URI InputFile = URI.create("/gpfs1/u/ac/ccguser/alatop.inp");
String InputFile = "/gpfs1/u/ac/ccguser/alatop.inp";
input_file.getType().changeType(URIParameterType.type);
((URIParameterType) input_file.getType()).setValue(InputFile);
input.add("input_file", input_file);
/*
* Output
*/
ParameterContextImpl output = new ParameterContextImpl();
ActualParameter replicated_file = new ActualParameter();
output.add("replicated_file", replicated_file);
// parameter
ct.setInput(input);
ct.setOutput(output);
PropertiesBasedServiceImpl service = new PropertiesBasedServiceImpl();
service.init();
service.execute(ct);
Assert.assertNotNull(ct.getOutput());
} catch (Exception e) {
e.printStackTrace();
fail("ERROR");
}
}
}