Package org.apache.hcatalog.hbase

Source Code of org.apache.hcatalog.hbase.HBaseHCatStorageHandler

/**
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements.  See the NOTICE file
* distributed with this work for additional information
* regarding copyright ownership.  The ASF licenses this file
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License.  You may obtain a copy of the License at
*
*     http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing,
* software distributed under the License is distributed on an
* "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
* KIND, either express or implied.  See the License for the
* specific language governing permissions and limitations
* under the License.
*/

package org.apache.hcatalog.hbase;

import java.io.IOException;
import java.util.ArrayList;
import java.util.HashSet;
import java.util.List;
import java.util.Map;
import java.util.Map.Entry;
import java.util.Set;

import org.apache.hadoop.conf.Configurable;
import org.apache.hadoop.conf.Configuration;
import org.apache.hadoop.fs.Path;
import org.apache.hadoop.hbase.HBaseConfiguration;
import org.apache.hadoop.hbase.HColumnDescriptor;
import org.apache.hadoop.hbase.HTableDescriptor;
import org.apache.hadoop.hbase.MasterNotRunningException;
import org.apache.hadoop.hbase.ZooKeeperConnectionException;
import org.apache.hadoop.hbase.client.HBaseAdmin;
import org.apache.hadoop.hbase.client.HTable;
import org.apache.hadoop.hbase.mapred.TableOutputFormat;
import org.apache.hadoop.hbase.mapreduce.TableInputFormat;
import org.apache.hadoop.hbase.mapreduce.TableMapReduceUtil;
import org.apache.hadoop.hbase.util.Bytes;
import org.apache.hadoop.hive.hbase.HBaseSerDe;
import org.apache.hadoop.hive.metastore.HiveMetaHook;
import org.apache.hadoop.hive.metastore.MetaStoreUtils;
import org.apache.hadoop.hive.metastore.api.MetaException;
import org.apache.hadoop.hive.metastore.api.Table;
import org.apache.hadoop.hive.ql.metadata.HiveException;
import org.apache.hadoop.hive.ql.plan.TableDesc;
import org.apache.hadoop.hive.ql.security.authorization.HiveAuthorizationProvider;
import org.apache.hadoop.hive.serde2.SerDe;
import org.apache.hadoop.mapred.InputFormat;
import org.apache.hadoop.mapred.JobConf;
import org.apache.hadoop.mapred.OutputFormat;
import org.apache.hadoop.util.StringUtils;
import org.apache.hcatalog.common.HCatConstants;
import org.apache.hcatalog.common.HCatUtil;
import org.apache.hcatalog.data.schema.HCatSchema;
import org.apache.hcatalog.mapreduce.HCatStorageHandler;
import org.apache.hcatalog.hbase.HBaseBulkOutputFormat.HBaseBulkOutputCommitter;
import org.apache.hcatalog.hbase.HBaseDirectOutputFormat.HBaseDirectOutputCommitter;
import org.apache.hcatalog.hbase.snapshot.RevisionManager;
import org.apache.hcatalog.hbase.snapshot.RevisionManagerConfiguration;
import org.apache.hcatalog.hbase.snapshot.Transaction;
import org.apache.hcatalog.mapreduce.HCatOutputFormat;
import org.apache.hcatalog.mapreduce.HCatTableInfo;
import org.apache.hcatalog.mapreduce.InputJobInfo;
import org.apache.hcatalog.mapreduce.OutputJobInfo;
import org.apache.thrift.TBase;
import org.apache.zookeeper.ZooKeeper;

import com.facebook.fb303.FacebookBase;
import com.google.common.util.concurrent.ThreadFactoryBuilder;

/**
* This class HBaseHCatStorageHandler provides functionality to create HBase
* tables through HCatalog. The implementation is very similar to the
* HiveHBaseStorageHandler, with more details to suit HCatalog.
*
* Note : As of 0.12, this class is considered deprecated and a candidate for future removal
* All new code must use the Hive HBaseStorageHandler instead
*
* @deprecated Use/modify {@link org.apache.hadoop.hive.hbase.HBaseStorageHandler} instead
*/
public class HBaseHCatStorageHandler extends HCatStorageHandler implements HiveMetaHook, Configurable {

  public final static String DEFAULT_PREFIX = "default.";
  private final static String PROPERTY_INT_OUTPUT_LOCATION = "hcat.hbase.mapreduce.intermediateOutputLocation";

  private Configuration hbaseConf;
  private Configuration jobConf;
  private HBaseAdmin admin;

  @Deprecated
  @Override
  public void configureInputJobProperties(TableDesc tableDesc, Map<String, String> jobProperties) {
    // Populate jobProperties with input table name, table columns, RM snapshot,
    // hbase-default.xml and hbase-site.xml
    Map<String, String> tableJobProperties = tableDesc.getJobProperties();
    String jobString = tableJobProperties.get(HCatConstants.HCAT_KEY_JOB_INFO);
    try {
      InputJobInfo inputJobInfo = (InputJobInfo) HCatUtil.deserialize(jobString);
      HCatTableInfo tableInfo = inputJobInfo.getTableInfo();
      String qualifiedTableName = HBaseHCatStorageHandler.getFullyQualifiedHBaseTableName(tableInfo);
      jobProperties.put(TableInputFormat.INPUT_TABLE, qualifiedTableName);

      Configuration jobConf = getJobConf();
      addResources(jobConf, jobProperties);
      JobConf copyOfConf = new JobConf(jobConf);
      HBaseConfiguration.addHbaseResources(copyOfConf);
      //Getting hbase delegation token in getInputSplits does not work with PIG. So need to
      //do it here
      if (jobConf instanceof JobConf) { //Should be the case
        HBaseUtil.addHBaseDelegationToken(copyOfConf);
        ((JobConf) jobConf).getCredentials().addAll(copyOfConf.getCredentials());
      }

      String outputSchema = jobConf.get(HCatConstants.HCAT_KEY_OUTPUT_SCHEMA);
      jobProperties.put(TableInputFormat.SCAN_COLUMNS, getScanColumns(tableInfo, outputSchema));

      String serSnapshot = (String) inputJobInfo.getProperties().get(
        HBaseConstants.PROPERTY_TABLE_SNAPSHOT_KEY);
      if (serSnapshot == null) {
        HCatTableSnapshot snapshot =
          HBaseRevisionManagerUtil.createSnapshot(
            RevisionManagerConfiguration.create(copyOfConf),
            qualifiedTableName, tableInfo);
        jobProperties.put(HBaseConstants.PROPERTY_TABLE_SNAPSHOT_KEY,
          HCatUtil.serialize(snapshot));
      }

      //This adds it directly to the jobConf. Setting in jobProperties does not get propagated
      //to JobConf as of now as the jobProperties is maintained per partition
      //TODO: Remove when HCAT-308 is fixed
      addOutputDependencyJars(jobConf);
      jobProperties.put("tmpjars", jobConf.get("tmpjars"));

    } catch (IOException e) {
      throw new IllegalStateException("Error while configuring job properties", e);
    }
  }

  @Deprecated
  @Override
  public void configureOutputJobProperties(TableDesc tableDesc, Map<String, String> jobProperties) {
    // Populate jobProperties with output table name, hbase-default.xml, hbase-site.xml, OutputJobInfo
    // Populate RM transaction in OutputJobInfo
    // In case of bulk mode, populate intermediate output location
    Map<String, String> tableJobProperties = tableDesc.getJobProperties();
    String jobString = tableJobProperties.get(HCatConstants.HCAT_KEY_OUTPUT_INFO);
    try {
      OutputJobInfo outputJobInfo = (OutputJobInfo) HCatUtil.deserialize(jobString);
      HCatTableInfo tableInfo = outputJobInfo.getTableInfo();
      String qualifiedTableName = HBaseHCatStorageHandler.getFullyQualifiedHBaseTableName(tableInfo);
      jobProperties.put(HBaseConstants.PROPERTY_OUTPUT_TABLE_NAME_KEY, qualifiedTableName);
      jobProperties.put(TableOutputFormat.OUTPUT_TABLE, qualifiedTableName);

      Configuration jobConf = getJobConf();
      addResources(jobConf, jobProperties);

      Configuration copyOfConf = new Configuration(jobConf);
      HBaseConfiguration.addHbaseResources(copyOfConf);

      String txnString = outputJobInfo.getProperties().getProperty(
        HBaseConstants.PROPERTY_WRITE_TXN_KEY);
      Transaction txn = null;
      if (txnString == null) {
        txn = HBaseRevisionManagerUtil.beginWriteTransaction(qualifiedTableName, tableInfo,
          RevisionManagerConfiguration.create(copyOfConf));
        String serializedTxn = HCatUtil.serialize(txn);
        outputJobInfo.getProperties().setProperty(HBaseConstants.PROPERTY_WRITE_TXN_KEY,
          serializedTxn);
      } else {
        txn = (Transaction) HCatUtil.deserialize(txnString);
      }
      if (isBulkMode(outputJobInfo)) {
        String tableLocation = tableInfo.getTableLocation();
        String location = new Path(tableLocation, "REVISION_" + txn.getRevisionNumber())
          .toString();
        outputJobInfo.getProperties().setProperty(PROPERTY_INT_OUTPUT_LOCATION, location);
        // We are writing out an intermediate sequenceFile hence
        // location is not passed in OutputJobInfo.getLocation()
        // TODO replace this with a mapreduce constant when available
        jobProperties.put("mapred.output.dir", location);
        jobProperties.put("mapred.output.committer.class", HBaseBulkOutputCommitter.class.getName());
      } else {
        jobProperties.put("mapred.output.committer.class", HBaseDirectOutputCommitter.class.getName());
      }

      jobProperties.put(HCatConstants.HCAT_KEY_OUTPUT_INFO, HCatUtil.serialize(outputJobInfo));
      addOutputDependencyJars(jobConf);
      jobProperties.put("tmpjars", jobConf.get("tmpjars"));

    } catch (IOException e) {
      throw new IllegalStateException("Error while configuring job properties", e);
    }
  }

  /*
  * @return instance of HiveAuthorizationProvider
  *
  * @throws HiveException
  *
  * @see org.apache.hive.hcatalog.storagehandler.HCatStorageHandler#
  * getAuthorizationProvider()
  */
  @Deprecated
  @Override
  public HiveAuthorizationProvider getAuthorizationProvider()
    throws HiveException {

    HBaseAuthorizationProvider hbaseAuth = new HBaseAuthorizationProvider();
    hbaseAuth.init(getConf());
    return hbaseAuth;
  }

  /*
   * @param table
   *
   * @throws MetaException
   *
   * @see org.apache.hive.hcatalog.storagehandler.HCatStorageHandler
   * #commitCreateTable(org.apache.hadoop.hive.metastore.api.Table)
   */
  @Deprecated
  @Override
  public void commitCreateTable(Table table) throws MetaException {
  }

  /*
   * @param instance of table
   *
   * @param deleteData
   *
   * @throws MetaException
   *
   * @see org.apache.hive.hcatalog.storagehandler.HCatStorageHandler
   * #commitDropTable(org.apache.hadoop.hive.metastore.api.Table, boolean)
   */
  @Deprecated
  @Override
  public void commitDropTable(Table tbl, boolean deleteData)
    throws MetaException {
    checkDeleteTable(tbl);

  }

  /*
   * @param instance of table
   *
   * @throws MetaException
   *
   * @see org.apache.hive.hcatalog.storagehandler.HCatStorageHandler
   * #preCreateTable(org.apache.hadoop.hive.metastore.api.Table)
   */
  @Deprecated
  @Override
  public void preCreateTable(Table tbl) throws MetaException {
    boolean isExternal = MetaStoreUtils.isExternalTable(tbl);

    hbaseConf = getConf();

    if (tbl.getSd().getLocation() != null) {
      throw new MetaException("LOCATION may not be specified for HBase.");
    }

    try {
      String tableName = getFullyQualifiedHBaseTableName(tbl);
      String hbaseColumnsMapping = tbl.getParameters().get(
        HBaseSerDe.HBASE_COLUMNS_MAPPING);

      if (hbaseColumnsMapping == null) {
        throw new MetaException(
          "No hbase.columns.mapping defined in table"
              + " properties.");
      }

      List<String> hbaseColumnFamilies = new ArrayList<String>();
      List<String> hbaseColumnQualifiers = new ArrayList<String>();
      List<byte[]> hbaseColumnFamiliesBytes = new ArrayList<byte[]>();
      int iKey = HBaseUtil.parseColumnMapping(hbaseColumnsMapping,
        hbaseColumnFamilies, hbaseColumnFamiliesBytes,
        hbaseColumnQualifiers, null);

      HTableDescriptor tableDesc;
      Set<String> uniqueColumnFamilies = new HashSet<String>();
      if (!getHBaseAdmin().tableExists(tableName)) {
        // if it is not an external table then create one
        if (!isExternal) {
          // Create the column descriptors
          tableDesc = new HTableDescriptor(tableName);
          uniqueColumnFamilies.addAll(hbaseColumnFamilies);
          uniqueColumnFamilies.remove(hbaseColumnFamilies.get(iKey));

          for (String columnFamily : uniqueColumnFamilies) {
            HColumnDescriptor familyDesc = new HColumnDescriptor(Bytes
              .toBytes(columnFamily));
            familyDesc.setMaxVersions(Integer.MAX_VALUE);
            tableDesc.addFamily(familyDesc);
          }

          getHBaseAdmin().createTable(tableDesc);
        } else {
          // an external table
          throw new MetaException("HBase table " + tableName
            + " doesn't exist while the table is "
            + "declared as an external table.");
        }

      } else {
        if (!isExternal) {
          throw new MetaException("Table " + tableName
            + " already exists within HBase."
            + " Use CREATE EXTERNAL TABLE instead to"
            + " register it in HCatalog.");
        }
        // make sure the schema mapping is right
        tableDesc = getHBaseAdmin().getTableDescriptor(
          Bytes.toBytes(tableName));

        for (int i = 0; i < hbaseColumnFamilies.size(); i++) {
          if (i == iKey) {
            continue;
          }

          if (!tableDesc.hasFamily(hbaseColumnFamiliesBytes.get(i))) {
            throw new MetaException("Column Family "
              + hbaseColumnFamilies.get(i)
              + " is not defined in hbase table " + tableName);
          }
        }
      }

      // ensure the table is online
      new HTable(hbaseConf, tableDesc.getName());

      //Set up table in revision manager.
      RevisionManager rm = HBaseRevisionManagerUtil.getOpenedRevisionManager(hbaseConf);
      rm.createTable(tableName, new ArrayList<String>(uniqueColumnFamilies));

    } catch (MasterNotRunningException mnre) {
      throw new MetaException(StringUtils.stringifyException(mnre));
    } catch (IOException ie) {
      throw new MetaException(StringUtils.stringifyException(ie));
    } catch (IllegalArgumentException iae) {
      throw new MetaException(StringUtils.stringifyException(iae));
    }

  }

  /*
   * @param table
   *
   * @throws MetaException
   *
   * @see org.apache.hive.hcatalog.storagehandler.HCatStorageHandler
   * #preDropTable(org.apache.hadoop.hive.metastore.api.Table)
   */
  @Deprecated
  @Override
  public void preDropTable(Table table) throws MetaException {
  }

  /*
   * @param table
   *
   * @throws MetaException
   *
   * @see org.apache.hive.hcatalog.storagehandler.HCatStorageHandler
   * #rollbackCreateTable(org.apache.hadoop.hive.metastore.api.Table)
   */
  @Deprecated
  @Override
  public void rollbackCreateTable(Table table) throws MetaException {
    checkDeleteTable(table);
  }

  /*
   * @param table
   *
   * @throws MetaException
   *
   * @see org.apache.hive.hcatalog.storagehandler.HCatStorageHandler
   * #rollbackDropTable(org.apache.hadoop.hive.metastore.api.Table)
   */
  @Deprecated
  @Override
  public void rollbackDropTable(Table table) throws MetaException {
  }

  /*
   * @return instance of HiveMetaHook
   *
   * @see org.apache.hive.hcatalog.storagehandler.HCatStorageHandler#getMetaHook()
   */
  @Deprecated
  @Override
  public HiveMetaHook getMetaHook() {
    return this;
  }

  private HBaseAdmin getHBaseAdmin() throws MetaException {
    try {
      if (admin == null) {
        admin = new HBaseAdmin(this.getConf());
      }
      return admin;
    } catch (MasterNotRunningException mnre) {
      throw new MetaException(StringUtils.stringifyException(mnre));
    } catch (ZooKeeperConnectionException zkce) {
      throw new MetaException(StringUtils.stringifyException(zkce));
    }
  }

  private String getFullyQualifiedHBaseTableName(Table tbl) {
    String tableName = tbl.getParameters().get(HBaseSerDe.HBASE_TABLE_NAME);
    if (tableName == null) {
      tableName = tbl.getSd().getSerdeInfo().getParameters()
        .get(HBaseSerDe.HBASE_TABLE_NAME);
    }
    if (tableName == null) {
      if (tbl.getDbName().equals(MetaStoreUtils.DEFAULT_DATABASE_NAME)) {
        tableName = tbl.getTableName();
      } else {
        tableName = tbl.getDbName() + "." + tbl.getTableName();
      }
      tableName = tableName.toLowerCase();
    }
    return tableName;
  }

  static String getFullyQualifiedHBaseTableName(HCatTableInfo tableInfo) {
    String qualifiedName = tableInfo.getStorerInfo().getProperties()
      .getProperty(HBaseSerDe.HBASE_TABLE_NAME);
    if (qualifiedName == null) {
      String databaseName = tableInfo.getDatabaseName();
      String tableName = tableInfo.getTableName();
      if ((databaseName == null)
        || (databaseName.equals(MetaStoreUtils.DEFAULT_DATABASE_NAME))) {
        qualifiedName = tableName;
      } else {
        qualifiedName = databaseName + "." + tableName;
      }
      qualifiedName = qualifiedName.toLowerCase();
    }
    return qualifiedName;
  }

  @Deprecated
  @Override
  public Class<? extends InputFormat> getInputFormatClass() {
    return HBaseInputFormat.class;
  }

  @Deprecated
  @Override
  public Class<? extends OutputFormat> getOutputFormatClass() {
    return HBaseBaseOutputFormat.class;
  }

  /*
  * @return subclass of SerDe
  *
  * @throws UnsupportedOperationException
  *
  * @see
  * org.apache.hive.hcatalog.storagehandler.HCatStorageHandler#getSerDeClass()
  */
  @Deprecated
  @Override
  public Class<? extends SerDe> getSerDeClass()
    throws UnsupportedOperationException {
    return HBaseSerDe.class;
  }

  @Deprecated
  public Configuration getJobConf() {
    return jobConf;
  }

  @Deprecated
  @Override
  public void configureJobConf(TableDesc tableDesc, JobConf jobConf) {
    // do nothing
  }

  @Deprecated
  @Override
  public Configuration getConf() {

    if (hbaseConf == null) {
      hbaseConf = HBaseConfiguration.create();
    }
    return hbaseConf;
  }

  @Deprecated
  @Override
  public void setConf(Configuration conf) {
    //setConf is called both during DDL operations and  mapred read/write jobs.
    //Creating a copy of conf for DDL and adding hbase-default and hbase-site.xml to it.
    //For jobs, maintaining a reference instead of cloning as we need to
    //  1) add hbase delegation token to the Credentials.
    //  2) set tmpjars on it. Putting in jobProperties does not get propagated to JobConf
    //     in case of InputFormat as they are maintained per partition.
    //Not adding hbase-default.xml and hbase-site.xml to jobConf as it will override any
    //hbase properties set in the JobConf by the user. In configureInputJobProperties and
    //configureOutputJobProperties, we take care of adding the default properties
    //that are not already present. TODO: Change to a copy for jobs after HCAT-308 is fixed.
    jobConf = conf;
    hbaseConf = RevisionManagerConfiguration.create(HBaseConfiguration.create(conf));
  }

  private void checkDeleteTable(Table table) throws MetaException {
    boolean isExternal = MetaStoreUtils.isExternalTable(table);
    String tableName = getFullyQualifiedHBaseTableName(table);
    RevisionManager rm = null;
    try {
      if (!isExternal && getHBaseAdmin().tableExists(tableName)) {
        // we have created an HBase table, so we delete it to roll back;
        if (getHBaseAdmin().isTableEnabled(tableName)) {
          getHBaseAdmin().disableTable(tableName);
        }
        getHBaseAdmin().deleteTable(tableName);

        //Drop table in revision manager.
        rm = HBaseRevisionManagerUtil.getOpenedRevisionManager(hbaseConf);
        rm.dropTable(tableName);
      }
    } catch (IOException ie) {
      throw new MetaException(StringUtils.stringifyException(ie));
    } finally {
      HBaseRevisionManagerUtil.closeRevisionManagerQuietly(rm);
    }
  }

  /**
   * Helper method for users to add the required depedency jars to distributed cache.
   * @param conf
   * @throws IOException
   */
  private void addOutputDependencyJars(Configuration conf) throws IOException {
    TableMapReduceUtil.addDependencyJars(conf,
      //ZK
      ZooKeeper.class,
      //HBase
      HTable.class,
      //Hive
      HiveException.class,
      //HCatalog jar
      HCatOutputFormat.class,
      //hcat hbase storage handler jar
      HBaseHCatStorageHandler.class,
      //hive hbase storage handler jar
      HBaseSerDe.class,
      //hive jar
      Table.class,
      //libthrift jar
      TBase.class,
      //hbase jar
      Bytes.class,
      //thrift-fb303 .jar
      FacebookBase.class,
      //guava jar
      ThreadFactoryBuilder.class);
  }

  /**
   * Utility method to add hbase-default.xml and hbase-site.xml properties to a new map
   * if they are not already present in the jobConf.
   * @param jobConf Job configuration
   * @param newJobProperties  Map to which new properties should be added
   */
  private void addResources(Configuration jobConf,
                Map<String, String> newJobProperties) {
    Configuration conf = new Configuration(false);
    HBaseConfiguration.addHbaseResources(conf);
    RevisionManagerConfiguration.addResources(conf);
    for (Entry<String, String> entry : conf) {
      if (jobConf.get(entry.getKey()) == null)
        newJobProperties.put(entry.getKey(), entry.getValue());
    }
  }

  public static boolean isBulkMode(OutputJobInfo outputJobInfo) {
    //Default is false
    String bulkMode = outputJobInfo.getTableInfo().getStorerInfo().getProperties()
      .getProperty(HBaseConstants.PROPERTY_BULK_OUTPUT_MODE_KEY,
        "false");
    return "true".equals(bulkMode);
  }

  private String getScanColumns(HCatTableInfo tableInfo, String outputColSchema) throws IOException {
    StringBuilder builder = new StringBuilder();
    String hbaseColumnMapping = tableInfo.getStorerInfo().getProperties()
      .getProperty(HBaseSerDe.HBASE_COLUMNS_MAPPING);
    if (outputColSchema == null) {
      String[] splits = hbaseColumnMapping.split("[,]");
      for (int i = 0; i < splits.length; i++) {
        if (!splits[i].equals(HBaseSerDe.HBASE_KEY_COL))
          builder.append(splits[i]).append(" ");
      }
    } else {
      HCatSchema outputSchema = (HCatSchema) HCatUtil.deserialize(outputColSchema);
      HCatSchema tableSchema = tableInfo.getDataColumns();
      List<String> outputFieldNames = outputSchema.getFieldNames();
      List<Integer> outputColumnMapping = new ArrayList<Integer>();
      for (String fieldName : outputFieldNames) {
        int position = tableSchema.getPosition(fieldName);
        outputColumnMapping.add(position);
      }
      List<String> columnFamilies = new ArrayList<String>();
      List<String> columnQualifiers = new ArrayList<String>();
      HBaseUtil.parseColumnMapping(hbaseColumnMapping, columnFamilies, null,
        columnQualifiers, null);
      for (int i = 0; i < outputColumnMapping.size(); i++) {
        int cfIndex = outputColumnMapping.get(i);
        String cf = columnFamilies.get(cfIndex);
        // We skip the key column.
        if (cf.equals(HBaseSerDe.HBASE_KEY_COL) == false) {
          String qualifier = columnQualifiers.get(i);
          builder.append(cf);
          builder.append(":");
          if (qualifier != null) {
            builder.append(qualifier);
          }
          builder.append(" ");
        }
      }
    }
    //Remove the extra space delimiter
    builder.deleteCharAt(builder.length() - 1);
    return builder.toString();
  }

}
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