Package uk.ac.cam.ch.wwmm.oscar3.flow

Examples of uk.ac.cam.ch.wwmm.oscar3.flow.OscarFlow.parseData()

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      return oscarFlow.getInlineXML();
    } else if(mode.equals("SAF")) {
      oscarFlow.processToSAF();
      return oscarFlow.getSafXML();
    } else if(mode.equals("Data")) {
      oscarFlow.parseData();
      return oscarFlow.getDataXML();
    } else if(mode.equals("RoundTrip")) {
      oscarFlow.processLite();
      ptsx.setSciXMLDoc(oscarFlow.getInlineXML());
      return ptsx.getAnnotatedPubXML();
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      if(request.getParameter("flowcommand") != null &&
          request.getParameter("flowcommand").trim().length() > 0) {
        oscarFlow.runFlow(request.getParameter("flowcommand"));
      } else if(outputMode.equals("data")) {
        oscarFlow.parseData();
      } else {
        oscarFlow.processLite();
      }
      if(outputMode.equals("default") && request.getParameter("flowcommand") != null &&
          !request.getParameter("flowcommand").toLowerCase().contains("inline")) {
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