Package org.sbml.jsbml

Examples of org.sbml.jsbml.Reaction.clone()

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        if (reactsIds != null) {
          for (int i = 0; i < reactsIds.length; i++) {
            Reaction relatedReaction = model.getReaction(reactsIds[i]);

            subModel.addReaction(relatedReaction.clone());

            if (relatedReaction.getKineticLaw() != null) {
              // TODO: Parameters!
              getRelatedFunctionsId(relatedFunctionsIdSet, allFunctionsIdSet, relatedReaction.getKineticLaw().getMath());
              processUnitsMap(unitsMap, model, relatedReaction.getKineticLaw());
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        if (reactsIds != null) {
          for (int i = 0; i < reactsIds.length; i++) {
            Reaction relatedReaction = model.getReaction(reactsIds[i]);

            subModel.addReaction(relatedReaction.clone());

            if (relatedReaction.getKineticLaw() != null) {
              // TODO: Parameters!
              getRelatedFunctionsId(relatedFunctionsIdSet, allFunctionsIdSet, relatedReaction.getKineticLaw().getMath());
              processUnitsMap(unitsMap, model, relatedReaction.getKineticLaw());
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        if (reactsIds != null) {
            for (int i = 0; i < reactsIds.length; i++) {
                Reaction relatedReaction = model.getReaction(reactsIds[i]);
               
                subModel.addReaction(relatedReaction.clone());
               
                if (relatedReaction.getKineticLaw() != null) {
                    getRelatedFunctionsId(relatedFunctionsIdSet, allFunctionsIdSet, relatedReaction.getKineticLaw().getMath());
                    processUnitsMap(unitsMap, model, relatedReaction.getKineticLaw());
                }
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