Package org.openbel.framework.core.indexer

Examples of org.openbel.framework.core.indexer.JDBMEquivalenceLookup.open()

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                            .getResourceLocation(), equivalenceIndex);

            JDBMEquivalenceLookup jdbmLookup =
                    new JDBMEquivalenceLookup(dataIndex.getEquivalenceIndex()
                            .getIndexPath());
            jdbmLookup.open();

            openEquivalences.put(equivalence.getNamespaceResourceLocation()
                    .getResourceLocation(),
                    jdbmLookup);
        }
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    @Test
    public void testLookupSuccess() {
        try {
            JDBMEquivalenceLookup jdbmLookup =
                    new JDBMEquivalenceLookup(indexPath.getAbsolutePath());
            jdbmLookup.open();

            assertEquals(1, jdbmLookup.getRecordCount());
            assertEquals(value, jdbmLookup.lookup(key));

            jdbmLookup.close();
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    @Test
    public void testLookupFailure() {
        try {
            JDBMEquivalenceLookup jdbmLookup =
                    new JDBMEquivalenceLookup(indexPath.getAbsolutePath());
            jdbmLookup.open();

            assertEquals(1, jdbmLookup.getRecordCount());
            assertNull(jdbmLookup.lookup("0"));

            jdbmLookup.close();
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    @Test
    public void testInverseLookupSuccess() {
        try {
            JDBMEquivalenceLookup jdbmLookup =
                    new JDBMEquivalenceLookup(indexPath.getAbsolutePath());
            jdbmLookup.open();

            assertEquals(1, jdbmLookup.getRecordCount());
            assertEquals(key, jdbmLookup.reverseLookup(value));

            jdbmLookup.close();
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    @Test
    public void testInverseLookupFailure() {
        try {
            JDBMEquivalenceLookup jdbmLookup =
                    new JDBMEquivalenceLookup(indexPath.getAbsolutePath());
            jdbmLookup.open();

            assertEquals(1, jdbmLookup.getRecordCount());
            assertNull(jdbmLookup.reverseLookup(new SkinnyUUID(UUID
                    .randomUUID())));
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    @Test
    public void testLookupSuccess() {
        try {
            JDBMEquivalenceLookup jdbmLookup =
                    new JDBMEquivalenceLookup(indexPath.getAbsolutePath());
            jdbmLookup.open();

            for (int i = 0; i < numToTest; i++) {
                SkinnyUUID uuid = uuids.get(i);
                assertEquals("Failed for " + i, uuid,
                        jdbmLookup.lookup(String.valueOf(i)));
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