inputStream = new FileInputStream(manifestFile);
manifest = parse(inputStream);
transformator = new ManifestTransformator();
transformator.apply(manifest);
applications = manifest.get("applications"); //$NON-NLS-1$
assertEquals("nativeA", applications.get(0).get("A").getValue()); //$NON-NLS-1$//$NON-NLS-2$
assertEquals("nativeB", applications.get(0).get("B").getValue()); //$NON-NLS-1$//$NON-NLS-2$
assertEquals("overriddenC", applications.get(0).get("C").getValue()); //$NON-NLS-1$//$NON-NLS-2$