Package org.data2semantics.exp.molecules

Examples of org.data2semantics.exp.molecules.MoleculeListSingleGraphExperiment.run()

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        kernelsIST.add(new RDFDTGraphIntersectionSubTreeKernel(depth,1,true));

        expIST = new MoleculeListSingleGraphExperiment(kernelsIST, seeds, svmParms, newGs.get(0), newIN.get(0), target, evalFuncs);

        System.out.println("IST running, remove hubs, th: " + th);
        expIST.run();

        for (Result res : expIST.getResults()) {
          resTableIST.addResult(res);
        }
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        kernelsIST.add(new RDFDTGraphIntersectionSubTreeKernel(depth,1,true));
 
        expIST = new MoleculeListSingleGraphExperiment(kernelsIST, seeds, svmParms, newGs.get(1), newIN.get(1), target, evalFuncs);

        System.out.println("IST running, relabel hubs, th: " + th);
        expIST.run();

        for (Result res : expIST.getResults()) {
          resTableIST.addResult(res);
        }
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        kernelsIST.add(new RDFDTGraphIntersectionSubTreeKernel(depth,1,true));
       
        expIST = new MoleculeListSingleGraphExperiment(kernelsIST, seeds, svmParms, newGs.get(2), newIN.get(2), target, evalFuncs);

        System.out.println("IST running, relabel+remove hubs, th: " + th);
        expIST.run();

        for (Result res : expIST.getResults()) {
          resTableIST.addResult(res);
        }
       
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