Examples of org.cipres.treebase.domain.tree.PhyloTreeService.findByTopology4s()

Class org.cipres.treebase.domain.tree.PhyloTreeService

Examples of org.cipres.treebase.domain.tree.PhyloTreeService.findByTopology4s()

org.cipres.treebase.domain.tree.PhyloTreeService.findByTopology4s()
Symmetric 4-taxon tree topology search Find trees containing these four labels, arranged as follows:
```
 a / /\ /  b / \ \  c \/ \ d 
```
Note that although the arguments are taxon variants, the trees returned may not refer to these taxon variants. But they will refer to the same underlying taxa that the argument taxonvariants do. @param a @param b @param c @param d @return the set of matching trees @author mjd

      checkTaxa(taxonVariant, 4);
      newRes = treeService.findByTopology4a(taxonVariant[0], taxonVariant[1], taxonVariant[2], taxonVariant[3]);
      break;
    case topology4sSearch:
      checkTaxa(taxonVariant, 4);
      newRes = treeService.findByTopology4s(taxonVariant[0], taxonVariant[1], taxonVariant[2], taxonVariant[3]);
      break;
    default:
      throw new Error ("Unknown search type '" + searchType + "'");
    }

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