Package org.broad.igv

Examples of org.broad.igv.PreferenceManager.override()

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    public void testProxy() throws IOException {

        final URL testURL = new URL(hg18URL);

        PreferenceManager mgr = PreferenceManager.getInstance();
        mgr.override(PreferenceManager.PROXY_HOST, "igvdev01.broadinstitute.org");
        mgr.override(PreferenceManager.PROXY_PORT, "3128");
        mgr.override(PreferenceManager.PROXY_USER, "proxytest");
        String enc_pword = Utilities.base64Encode("test@123");
        mgr.override(PreferenceManager.PROXY_PW, enc_pword);
        mgr.override(PreferenceManager.USE_PROXY, "true");
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        final URL testURL = new URL(hg18URL);

        PreferenceManager mgr = PreferenceManager.getInstance();
        mgr.override(PreferenceManager.PROXY_HOST, "igvdev01.broadinstitute.org");
        mgr.override(PreferenceManager.PROXY_PORT, "3128");
        mgr.override(PreferenceManager.PROXY_USER, "proxytest");
        String enc_pword = Utilities.base64Encode("test@123");
        mgr.override(PreferenceManager.PROXY_PW, enc_pword);
        mgr.override(PreferenceManager.USE_PROXY, "true");
        mgr.override(PreferenceManager.PROXY_AUTHENTICATE, "true");
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        final URL testURL = new URL(hg18URL);

        PreferenceManager mgr = PreferenceManager.getInstance();
        mgr.override(PreferenceManager.PROXY_HOST, "igvdev01.broadinstitute.org");
        mgr.override(PreferenceManager.PROXY_PORT, "3128");
        mgr.override(PreferenceManager.PROXY_USER, "proxytest");
        String enc_pword = Utilities.base64Encode("test@123");
        mgr.override(PreferenceManager.PROXY_PW, enc_pword);
        mgr.override(PreferenceManager.USE_PROXY, "true");
        mgr.override(PreferenceManager.PROXY_AUTHENTICATE, "true");
        HttpUtils.getInstance().updateProxySettings();
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        PreferenceManager mgr = PreferenceManager.getInstance();
        mgr.override(PreferenceManager.PROXY_HOST, "igvdev01.broadinstitute.org");
        mgr.override(PreferenceManager.PROXY_PORT, "3128");
        mgr.override(PreferenceManager.PROXY_USER, "proxytest");
        String enc_pword = Utilities.base64Encode("test@123");
        mgr.override(PreferenceManager.PROXY_PW, enc_pword);
        mgr.override(PreferenceManager.USE_PROXY, "true");
        mgr.override(PreferenceManager.PROXY_AUTHENTICATE, "true");
        HttpUtils.getInstance().updateProxySettings();

        long contentLength = 0;
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        mgr.override(PreferenceManager.PROXY_HOST, "igvdev01.broadinstitute.org");
        mgr.override(PreferenceManager.PROXY_PORT, "3128");
        mgr.override(PreferenceManager.PROXY_USER, "proxytest");
        String enc_pword = Utilities.base64Encode("test@123");
        mgr.override(PreferenceManager.PROXY_PW, enc_pword);
        mgr.override(PreferenceManager.USE_PROXY, "true");
        mgr.override(PreferenceManager.PROXY_AUTHENTICATE, "true");
        HttpUtils.getInstance().updateProxySettings();

        long contentLength = 0;
        try {
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        mgr.override(PreferenceManager.PROXY_PORT, "3128");
        mgr.override(PreferenceManager.PROXY_USER, "proxytest");
        String enc_pword = Utilities.base64Encode("test@123");
        mgr.override(PreferenceManager.PROXY_PW, enc_pword);
        mgr.override(PreferenceManager.USE_PROXY, "true");
        mgr.override(PreferenceManager.PROXY_AUTHENTICATE, "true");
        HttpUtils.getInstance().updateProxySettings();

        long contentLength = 0;
        try {
            contentLength = HttpUtils.getInstance().getContentLength(testURL);
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