Package loci.common

Examples of loci.common.RandomAccessInputStream.readInt()

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    RandomAccessInputStream ras = getCZTag(ifd);
    if (ras == null) return 1;
    ras.order(littleEndian);

    ras.seek(264);
    dimensionP = ras.readInt();
    dimensionM = ras.readInt();
    ras.close();

    int nSeries = dimensionM * dimensionP;
    return nSeries <= 0 ? 1 : nSeries;
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    if (ras == null) return 1;
    ras.order(littleEndian);

    ras.seek(264);
    dimensionP = ras.readInt();
    dimensionM = ras.readInt();
    ras.close();

    int nSeries = dimensionM * dimensionP;
    return nSeries <= 0 ? 1 : nSeries;
  }
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      return;
    }

    ras.seek(16);

    ms.sizeZ = ras.readInt();
    ras.skipBytes(4);
    ms.sizeT = ras.readInt();

    int dataType = ras.readInt();
    switch (dataType) {
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    ras.seek(16);

    ms.sizeZ = ras.readInt();
    ras.skipBytes(4);
    ms.sizeT = ras.readInt();

    int dataType = ras.readInt();
    switch (dataType) {
      case 2:
        addSeriesMeta("DataType", "12 bit unsigned integer");
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    ms.sizeZ = ras.readInt();
    ras.skipBytes(4);
    ms.sizeT = ras.readInt();

    int dataType = ras.readInt();
    switch (dataType) {
      case 2:
        addSeriesMeta("DataType", "12 bit unsigned integer");
        break;
      case 5:
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        addSeriesMeta("DataType", "8 bit unsigned integer");
    }

    if (getMetadataOptions().getMetadataLevel() != MetadataLevel.MINIMUM) {
      ras.seek(0);
      addSeriesMeta("MagicNumber ", ras.readInt());
      addSeriesMeta("StructureSize", ras.readInt());
      addSeriesMeta("DimensionX", ras.readInt());
      addSeriesMeta("DimensionY", ras.readInt());

      ras.seek(32);
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    }

    if (getMetadataOptions().getMetadataLevel() != MetadataLevel.MINIMUM) {
      ras.seek(0);
      addSeriesMeta("MagicNumber ", ras.readInt());
      addSeriesMeta("StructureSize", ras.readInt());
      addSeriesMeta("DimensionX", ras.readInt());
      addSeriesMeta("DimensionY", ras.readInt());

      ras.seek(32);
      addSeriesMeta("ThumbnailX", ras.readInt());
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    if (getMetadataOptions().getMetadataLevel() != MetadataLevel.MINIMUM) {
      ras.seek(0);
      addSeriesMeta("MagicNumber ", ras.readInt());
      addSeriesMeta("StructureSize", ras.readInt());
      addSeriesMeta("DimensionX", ras.readInt());
      addSeriesMeta("DimensionY", ras.readInt());

      ras.seek(32);
      addSeriesMeta("ThumbnailX", ras.readInt());
      addSeriesMeta("ThumbnailY", ras.readInt());
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    if (getMetadataOptions().getMetadataLevel() != MetadataLevel.MINIMUM) {
      ras.seek(0);
      addSeriesMeta("MagicNumber ", ras.readInt());
      addSeriesMeta("StructureSize", ras.readInt());
      addSeriesMeta("DimensionX", ras.readInt());
      addSeriesMeta("DimensionY", ras.readInt());

      ras.seek(32);
      addSeriesMeta("ThumbnailX", ras.readInt());
      addSeriesMeta("ThumbnailY", ras.readInt());
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      addSeriesMeta("StructureSize", ras.readInt());
      addSeriesMeta("DimensionX", ras.readInt());
      addSeriesMeta("DimensionY", ras.readInt());

      ras.seek(32);
      addSeriesMeta("ThumbnailX", ras.readInt());
      addSeriesMeta("ThumbnailY", ras.readInt());

      // pixel sizes are stored in meters, we need them in microns
      pixelSizeX = ras.readDouble() * 1000000;
      pixelSizeY = ras.readDouble() * 1000000;
 
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