.getCarbonylCarbonAtom());
for (int i = monomerCount; --i > monomerIndexFirst;) {
amino = (AminoMonomer) alphaPolymer.monomers[i];
vectorCO.sub(amino.getCarbonylOxygenAtom(), amino
.getCarbonylCarbonAtom());
if (vectorCOSum.angle(vectorCO) < (float) Math.PI / 2)
vectorCOSum.add(vectorCO);
else
vectorCOSum.sub(vectorCO);
}
heightUnitVector = vectorCO; // just reuse the same temp vector;