Package ij.plugin.filter

Examples of ij.plugin.filter.ParticleAnalyzer.analyze()

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    int measurements = CENTROID;
    int minSize = 1;
    int maxSize = 999999;
    ResultsTable rt = new ResultsTable();
    ParticleAnalyzer pa = new ParticleAnalyzer(options, measurements, rt, minSize, maxSize);
    if (!pa.analyze(imp2))
      return;
    float[] y = rt.getColumn(ResultsTable.X_CENTROID);
    if (y==null)
      return;       
    float[] x = rt.getColumn(ResultsTable.Y_CENTROID);
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    int measurements = CENTROID;
    int minSize = 1;
    int maxSize = 999999;
    ResultsTable rt = new ResultsTable();
    ParticleAnalyzer pa = new ParticleAnalyzer(options, measurements, rt, minSize, maxSize);
    if (!pa.analyze(imp2))
      return;
    float[] y = rt.getColumn(ResultsTable.X_CENTROID);
    if (y==null)
      return;       
    float[] x = rt.getColumn(ResultsTable.Y_CENTROID);
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    // Get the number of particles in the first frame
    ResultsTable rt = new ResultsTable();
    rt.reset();
    ParticleAnalyzer pa = new ParticleAnalyzer(options, measurements, rt, minSize, maxSize);
    pa.analyze(imp, stack.getProcessor(1));
    nParticles = rt.getCounter();
   
    if (nInitialCount == nParticles) {
      // check to make sure that there are exactly nParticles entries
      if (sxInitial != null && syInitial != null) {
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    float[] sySorted = new float [nParticles];

    for (int iFrame=1; iFrame<=nFrames; iFrame++) {
      rt.reset();
      pa = new ParticleAnalyzer(options, measurements, rt, minSize, maxSize);
      pa.analyze(imp, stack.getProcessor(iFrame));
      float[] sxRes = rt.getColumn(ResultsTable.X_CENTROID);       
      float[] syRes = rt.getColumn(ResultsTable.Y_CENTROID);
      if (sxRes==null)
        return;
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    // Get the number of particles in the first frame
    ResultsTable rt = new ResultsTable();
    rt.reset();
    ParticleAnalyzer pa = new ParticleAnalyzer(options, measurements, rt, minSize, maxSize);
    pa.analyze(imp, stack.getProcessor(1));
    nParticles = rt.getCounter();
   
    if (nInitialCount == nParticles) {
      // check to make sure that there are exactly nParticles entries
      if (sxInitial != null && syInitial != null) {
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    float[] sySorted = new float [nParticles];

    for (int iFrame=1; iFrame<=nFrames; iFrame++) {
      rt.reset();
      pa = new ParticleAnalyzer(options, measurements, rt, minSize, maxSize);
      pa.analyze(imp, stack.getProcessor(iFrame));
      float[] sxRes = rt.getColumn(ResultsTable.X_CENTROID);       
      float[] syRes = rt.getColumn(ResultsTable.Y_CENTROID);
      if (sxRes==null)
        return;
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