Package htsjdk.tribble.util

Examples of htsjdk.tribble.util.LittleEndianOutputStream.writeLong()

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            LinkedHashMap<String, Long> chrIndex = new LinkedHashMap<String, Long>();

            String[] line = new String[readers.length];

            // Placeholder for index position
            peakWriter.writeLong(0l);

            // Track line
            peakWriter.writeString("track name=" + factor + " sample=" + factor + " viewLimits=0:100 useScore=1 color=" + c);

            // Time values
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            // Write out index
            indexPosition = peakWriter.getWrittenCount();
            peakWriter.writeInt(chrIndex.size());
            for (Map.Entry<String, Long> entry : chrIndex.entrySet()) {
                peakWriter.writeString(entry.getKey());
                peakWriter.writeLong(entry.getValue());
            }

        } finally {
            if (peakWriter != null) {
                peakWriter.close();
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        los.writeString("Binary test file");
        los.writeFloat(Float.MAX_VALUE);
        los.writeByte(Byte.MAX_VALUE);
        los.writeShort(Short.MAX_VALUE);
        los.writeInt(Integer.MAX_VALUE);
        los.writeLong(Long.MAX_VALUE);
        los.writeDouble(Double.MAX_VALUE);

        los.close();

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