Examples of gnu.trove.iterator.TDoubleDoubleIterator.key()

Class gnu.trove.iterator.TDoubleDoubleIterator

Examples of gnu.trove.iterator.TDoubleDoubleIterator.key()

gnu.trove.iterator.TDoubleDoubleIterator.key()
Provides access to the key of the mapping at the iterator's position. Note that you must advance() the iterator at least once before invoking this method. @return the key of the entry at the iterator's current position.

  private TDoubleDoubleMap recalc_score_hash(TDoubleDoubleMap scores, double[] column, double least_sufficient) {
    TDoubleDoubleMap new_scores = new TDoubleDoubleHashMap(scores.size());
    TDoubleDoubleIterator iterator = scores.iterator();
    while(iterator.hasNext()) {
      iterator.advance();
      double score = iterator.key();
      double count = iterator.value();
      for (int letter = 0; letter < 4; ++letter) {
        double new_score = score + column[letter];
        if (new_score >= least_sufficient) {
          double add = count * background.count(letter);

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        TDoubleDoubleHashMap second_scores = iterator.value();


        TDoubleDoubleIterator second_iterator = second_scores.iterator();
        while (second_iterator.hasNext()) {
          second_iterator.advance();
          double score_second = second_iterator.key();
          double count = second_iterator.value();


          for (int last_letter = 0; last_letter < 4; ++last_letter) {
            double new_score_first = score_first + firstColumn[4 * first_letter + last_letter];

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    }
    for(int previousLetter = 0; previousLetter < 4; ++previousLetter) {
      TDoubleDoubleIterator iterator = scores[previousLetter].iterator();
      while(iterator.hasNext()) {
        iterator.advance();
        double score = iterator.key();
        double count = iterator.value();


        for (int letter = 0; letter < 4; ++letter) {
          double new_score = score + column[previousLetter*4 + letter];
          if (new_score >= least_sufficient[letter]) {

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    TDoubleDoubleMap combined_scores = new TDoubleDoubleHashMap();
    for (int i = 0; i < 4; ++i) {
      TDoubleDoubleIterator iterator = scores[i].iterator();
      while(iterator.hasNext()) {
        iterator.advance();
        double score = iterator.key();
        double count = iterator.value();
        combined_scores.adjustOrPutValue(score, count, count);
      }
    }
    return combined_scores;

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      TDoubleDoubleHashMap second_scores = iterator.value();


      TDoubleDoubleIterator second_iterator = second_scores.iterator();
      while (second_iterator.hasNext()) {
        second_iterator.advance();
        double score_second = second_iterator.key();
        double count = second_iterator.value();


        for (int letter = 0; letter < PWM.ALPHABET_SIZE; ++letter) {
          double new_score_first = score_first + firstColumn[letter];

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      TDoubleDoubleHashMap second_scores = iterator.value();


      TDoubleDoubleIterator second_iterator = second_scores.iterator();
      while (second_iterator.hasNext()) {
        second_iterator.advance();
        double score_second = second_iterator.key();
        double count = second_iterator.value();


        for (int letter = 0; letter < PWM.ALPHABET_SIZE; ++letter) {
          double new_score_first = score_first + firstColumn[letter];

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    if (cache_best_score == null) { // cache
      double max_score = Double.NEGATIVE_INFINITY;
      TDoubleDoubleIterator iterator = score_count_hash.iterator();
      while (iterator.hasNext()) {
        iterator.advance();
        double score = iterator.key();
        max_score = Math.max(score, max_score);
      }
      cache_best_score = max_score;
    }
    return cache_best_score;

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    double accum = 0.0;
    TDoubleDoubleIterator iterator = score_count_hash.iterator();
    while(iterator.hasNext()) {
      iterator.advance();
      double score = iterator.key();
      double count = iterator.value();
      if (score >= threshold) {
        accum += count;
      }
    }

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