Examples of au.org.intersect.samifier.filter.PeptideSearchResultFilter.accepts()

Package au.org.intersect.samifier.filter

Class au.org.intersect.samifier.filter.PeptideSearchResultFilter

Examples of au.org.intersect.samifier.filter.PeptideSearchResultFilter.accepts()

au.org.intersect.samifier.filter.PeptideSearchResultFilter.accepts()
Implementations of this interface should return true in the peptideSearchResult should be procesed @param peptideSearchResult the peptide search result to filter @return true if the peptide passes the filter

        if (confidenceScore != null) {
            peptideFilter = new ConfidenceScoreFilter(confidenceScore);
        }


        for (PeptideSearchResult result : peptideSearchResults) {
            if (peptideFilter != null && !peptideFilter.accepts(result)) {
                continue;
            }


            PeptideSequence peptide = sequenceGenerator.getPeptideSequence(result);
            if (peptide == null) {

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