Package au.org.intersect.samifier.domain

Examples of au.org.intersect.samifier.domain.ResultsAnalyserOutputter.toQuery()

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                        .parseTableFile(translationTableFile);
                ResultsAnalyserOutputter outputter = new ResultsAnalyserOutputter(
                        peptideSearchResult, proteinToOLNMap, genome,
                        peptideSequence, translationTable);
                if (outputter.isValid()) {
                    String query = outputter.toQuery();
                // System.out.println(query);
                    hsqldb.execute(query);
                }
            } else {
                ResultsAnalyserOutputter outputter = new ResultsAnalyserOutputter(
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            } else {
                ResultsAnalyserOutputter outputter = new ResultsAnalyserOutputter(
                        peptideSearchResult, proteinToOLNMap, genome,
                        peptideSequence);
                if (outputter.isValid()) {
                    hsqldb.execute(outputter.toQuery());
                }
            }
        }

        Collection<String> resultSet = hsqldb.filterResult(sqlQuery);
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