for (String id : ids) {
// @TODO: implement me!
progressDialog.increasePrimaryProgressCounter();
Identification identification = prideXmlReader.getIdentById(id);
List<PeptideItem> peptides = identification.getPeptideItem();
for (PeptideItem peptide : peptides) {
String residue = peptide.getSequence().substring(peptide.getSequence().length() - 1);
if (!peptideLastResidues.containsKey(residue)) {