Package stallone.datasequence.io

Examples of stallone.datasequence.io.DcdReader

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//        ConsoleHandler handler = new ConsoleHandler();
//        handler.setLevel(Level.FINEST);
//        Logger.getLogger(DcdReader.class.getName()).addHandler(handler);
       
       
        DcdReader reader = new DcdReader(input);
        seq = reader.load();
        writer = new DcdWriter(output, reader.size(), 3);
    }
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        writer.addAll(seq);
    }
   
    @Test
    public void compareWrittenWithPreviouslyRed() throws IOException {
        DcdReader reader = new DcdReader(output);
        IDataSequence outputSeq = reader.load();
        assertTrue("length of input and output", seq.size() == outputSeq.size());
       
        int size = seq.size();
        for(int i = 0; i < size; i++) {
            assertArrayEquals("trajectory with index " + i + " differs.",
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Related Classes of stallone.datasequence.io.DcdReader

  • stallone.api.datasequence.IDataList
  • stallone.datasequence.io.TestDCDReaderWriter
  • stallone.io.NicelyCachedRandomAccessFile
  • java.util.BitSet
  • java.nio.FloatBuffer
  • java.nio.ByteBuffer
  • java.io.IOException
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