Examples of stallone.api.doubles.IDoubleList

stallone.api.doubles.IDoubleList
@author noe

        int samplingtime = parser.getInt("samplingtime",0);
        //double windowfraction = parser.getDouble("windowfraction",0);
        boolean subtractMean = parser.hasCommand("subtractmean");




        IDoubleList lagtimes = doublesNew.listFrom(0, 1);
        while (lagtimes.get(lagtimes.size() - 1) < maxtime)
        {
            lagtimes.append((int) ((lagtimes.get(lagtimes.size() - 1) + 1) * lagtmult));
        }
        //IDoubleArray lagtimes = doublesNew.arrayFrom(1, 2, 5, 10, 20, 50, 100, 200, 500, 1000, 2000, 5000, 10000, 20000, 50000, 100000, 200000, 500000, 1000000);
        IDoubleArray averageWidths = doublesNew.array(lagtimes.size());
        for (int i = 0; i < averageWidths.size(); i++)
        {
            averageWidths.set(i, 1.0);
            //averageWidths.set(i, Math.max(1.0, windowfraction * lagtimes.get(i)));
            //System.out.println(lagtimes.get(i)+"\t"+averageWidths.get(i));
        }
        //System.out.println();
        //System.exit(0);
        EventBinningCorrelator correlator = new EventBinningCorrelator(lagtimes, averageWidths, samplingtime);




        for (int i = 0; i < inputFiles.size(); i++)
        {
            IDoubleArray time = data.readColumn(inputFiles.get(i), timecol);
            IDoubleArray don = data.readColumn(inputFiles.get(i), col1);
            IDoubleArray acc = data.readColumn(inputFiles.get(i), col2);
            IDoubleArray E = doublesNew.array(don.size());
            for (int j = 0; j < E.size(); j++)
            {
                E.set(j, acc.get(j) / (don.get(j) + acc.get(j)));
            }


            correlator.add(time, E);
        }


        IDoubleArray corr = null;
        if (subtractMean)
        {
            corr = correlator.getCorrelationMeanFree();
        }
        else
        {
            corr = correlator.getCorrelation();
        }




        //IDoubleArray corr = correlator.correlate(time, E);


        for (int i = 0; i < lagtimes.size(); i++)
        {
            System.out.println(lagtimes.get(i) + "\t" + corr.get(i));
        }
    }

View Full Code Here

        int col2 = parser.getInt("columns", 2);
        int maxtime = parser.getInt("maxtime", 0);
        boolean subtractMean = parser.hasCommand("subtractmean");




        IDoubleList lagtimes = doublesNew.listFrom(0,1);
        while (lagtimes.get(lagtimes.size() - 1) < maxtime)
        {
            lagtimes.append((int)((lagtimes.get(lagtimes.size() - 1) + 1) * 1.1));
        }
        //IDoubleArray lagtimes = doublesNew.arrayFrom(1, 2, 5, 10, 20, 50, 100, 200, 500, 1000, 2000, 5000, 10000, 20000, 50000, 100000, 200000, 500000, 1000000);
        IDoubleArray averageWidths = doublesNew.array(lagtimes.size());
        for (int i = 0; i < averageWidths.size(); i++)
        {
            averageWidths.set(i, 0.1 * lagtimes.get(i));
            //System.out.println(lagtimes.get(i)+"\t"+averageWidths.get(i));
        }
        //System.out.println();


        SmoothedCorrelator correlator = new SmoothedCorrelator(lagtimes, averageWidths);




        for (int i = 0; i < inputFiles.size(); i++)
        {
            IDoubleArray time = data.readColumn(inputFiles.get(i), timecol);
            IDoubleArray don = data.readColumn(inputFiles.get(i), col1);
            IDoubleArray acc = data.readColumn(inputFiles.get(i), col2);
            IDoubleArray E = doublesNew.array(don.size());
            for (int j = 0; j < E.size(); j++)
            {
                E.set(j, acc.get(j) / (don.get(j) + acc.get(j)));
            }


            correlator.add(time, E);
        }


        IDoubleArray corr = null;
        if (subtractMean)
            corr=correlator.getCorrelationMeanFree();
        else
            corr=correlator.getCorrelation();




        //IDoubleArray corr = correlator.correlate(time, E);


        for (int i = 0; i < lagtimes.size(); i++)
        {
            System.out.println(lagtimes.get(i) + "\t" + corr.get(i));
        }
    }

View Full Code Here

        int col2 = parser.getInt("columns", 2);
        int maxtime = parser.getInt("maxtime", 0);
        boolean subtractMean = parser.hasCommand("subtractmean");




        IDoubleList lagtimes = doublesNew.listFrom(1);
        while (lagtimes.get(lagtimes.size() - 1) < maxtime)
        {
            lagtimes.append((lagtimes.get(lagtimes.size() - 1) + 1) * 1.1);
        }
        //IDoubleArray lagtimes = doublesNew.arrayFrom(1, 2, 5, 10, 20, 50, 100, 200, 500, 1000, 2000, 5000, 10000, 20000, 50000, 100000, 200000, 500000, 1000000);
        IDoubleArray averageWidths = doublesNew.array(lagtimes.size());
        for (int i = 0; i < averageWidths.size(); i++)
        {
            averageWidths.set(i, Math.max(1.0, 0.1 * lagtimes.get(i)));
        }
        EventCorrelator correlator = new EventCorrelator(lagtimes, averageWidths);




        for (int i = 0; i < inputFiles.size(); i++)
        {
            IDoubleArray time = data.readColumn(inputFiles.get(i), timecol);
            IDoubleArray don = data.readColumn(inputFiles.get(i), col1);
            IDoubleArray acc = data.readColumn(inputFiles.get(i), col2);
            IDoubleArray E = doublesNew.array(don.size());
            for (int j = 0; j < E.size(); j++)
            {
                E.set(j, acc.get(j) / (don.get(j) + acc.get(j)));
            }


            correlator.add(time, E);
        }


        IDoubleArray corr = null;
        if (subtractMean)
            corr=correlator.getCorrelationMeanFree();
        else
            corr=correlator.getCorrelation();




        //IDoubleArray corr = correlator.correlate(time, E);


        for (int i = 0; i < lagtimes.size(); i++)
        {
            System.out.println(lagtimes.get(i) + "\t" + corr.get(i));
        }
    }

View Full Code Here

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Related Classes of stallone.api.doubles.IDoubleList

stallone.stat.EventBinningCorrelator

stallone.stat.EventCorrelator

stallone.stat.SmoothedCorrelator

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